Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ANKRD20A19P-203ENST00000602724 295 ntBASIC6.35□□□□□ -1.39
SHISA3A0PJX4 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SHISA3A0PJX4 AC019131.2-201ENST00000609071 870 ntBASIC6.35□□□□□ -1.39
SHISA3A0PJX4 AP005137.2-201ENST00000609238 400 ntBASIC6.35□□□□□ -1.39
SHISA3A0PJX4 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC6.35□□□□□ -1.39
SHISA3A0PJX4 AC007342.8-201ENST00000623278 678 ntBASIC6.35□□□□□ -1.39
SHISA3A0PJX4 AC025048.6-202ENST00000627667 438 ntBASIC6.35□□□□□ -1.39
SHISA3A0PJX4 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC6.35□□□□□ -1.39
SHISA3A0PJX4 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.35□□□□□ -1.39
SHISA3A0PJX4 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHISA3A0PJX4 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SHISA3A0PJX4 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHISA3A0PJX4 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHISA3A0PJX4 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
SHISA3A0PJX4 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.35□□□□□ -1.39
SHISA3A0PJX4 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC6.35□□□□□ -1.39
SHISA3A0PJX4 MRRFP1-201ENST00000435941 1675 ntBASIC6.35□□□□□ -1.39
SHISA3A0PJX4 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.35□□□□□ -1.39
SHISA3A0PJX4 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHISA3A0PJX4 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
SHISA3A0PJX4 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.35□□□□□ -1.39
SHISA3A0PJX4 ASNSP6-201ENST00000592770 1618 ntBASIC6.35□□□□□ -1.39
SHISA3A0PJX4 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.35□□□□□ -1.39
SHISA3A0PJX4 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SHISA3A0PJX4 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.35□□□□□ -1.39
SHISA3A0PJX4 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHISA3A0PJX4 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHISA3A0PJX4 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
SHISA3A0PJX4 MITF-202ENST00000314589 1993 ntTSL 2 BASIC6.35□□□□□ -1.39
SHISA3A0PJX4 AC022507.1-201ENST00000548349 1505 ntBASIC6.35□□□□□ -1.39
SHISA3A0PJX4 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHISA3A0PJX4 Z93929.1-201ENST00000418200 1475 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 HAVCR1-205ENST00000523175 1449 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 MTCO1P6-201ENST00000481192 1384 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 SLC10A5P1-201ENST00000379063 1306 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 CLCA3P-203ENST00000490028 2781 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 OR5E1P-201ENST00000305754 927 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 MIR106B-201ENST00000385301 82 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 OR6C69P-201ENST00000394268 893 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 RPS7P13-201ENST00000413955 498 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 YBX1P8-201ENST00000421881 943 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 ATP5G1P5-201ENST00000429024 411 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 ARL6IP1P2-201ENST00000431356 563 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 RPL3P8-201ENST00000432928 1191 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 AC093155.1-201ENST00000440164 826 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 HMGB1P16-201ENST00000447155 540 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 CALM1P2-201ENST00000452941 448 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 AL358876.1-201ENST00000453364 1075 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 RPL5P17-201ENST00000469685 877 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 BX890604.1-206ENST00000471090 922 ntTSL 3 BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 RN7SL259P-201ENST00000478499 253 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 Z99943.2-201ENST00000507585 266 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 OR51A1P-201ENST00000511110 946 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 NTAN1P2-201ENST00000515730 940 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 RN7SKP244-201ENST00000516513 307 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 AC092709.1-201ENST00000521355 1045 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 ADI1P3-201ENST00000549509 470 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 AC009997.1-201ENST00000557862 129 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 TPRKBP2-201ENST00000565969 475 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 SNORA59B-202ENST00000578183 701 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 AC087645.1-201ENST00000588528 291 ntBASIC6.34□□□□□ -1.39
SHISA3A0PJX4 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.34□□□□□ -1.39
SHISA3A0PJX4 AL109933.4-201ENST00000612111 157 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms