Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC7.35□□□□□ -1.23
NEUROD4Q9HD90 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NEUROD4Q9HD90 MITF-214ENST00000472437 1995 ntAPPRIS ALT1 TSL 2 BASIC7.35□□□□□ -1.23
NEUROD4Q9HD90 HAVCR1-205ENST00000523175 1449 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
NEUROD4Q9HD90 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.35□□□□□ -1.23
NEUROD4Q9HD90 AC245100.2-201ENST00000454544 1679 ntBASIC7.35□□□□□ -1.23
NEUROD4Q9HD90 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
NEUROD4Q9HD90 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.35□□□□□ -1.23
NEUROD4Q9HD90 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
NEUROD4Q9HD90 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 GLRA4-201ENST00000372617 1795 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 OCM-201ENST00000242104 695 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 RNA5SP301-201ENST00000362537 121 ntBASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 RNU6-692P-201ENST00000384496 107 ntBASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 MIR30C1-201ENST00000385227 89 ntBASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 SRI-202ENST00000394641 653 ntTSL 2 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 HMGB3P23-201ENST00000414981 585 ntBASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 PPIAP25-201ENST00000420177 540 ntBASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 KCTD9P3-201ENST00000434597 1169 ntBASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 MTND4LP10-201ENST00000435146 291 ntBASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 ANKRD30BP3-201ENST00000444850 1070 ntBASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 PSPHP1-201ENST00000450062 261 ntBASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 MTCO3P11-201ENST00000455103 774 ntBASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 ARPC3P2-201ENST00000457786 533 ntBASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 PSAT1P4-201ENST00000466500 526 ntBASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 PTGES3P3-201ENST00000511479 482 ntBASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 KCTD21-AS1-204ENST00000528468 554 ntTSL 4 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 AP003174.3-201ENST00000537926 516 ntBASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 LINC02318-202ENST00000556346 715 ntTSL 3 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 NIFKP8-201ENST00000560500 874 ntBASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 AC012146.2-201ENST00000576545 416 ntBASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 AC068631.1-229ENST00000599314 739 ntTSL 5 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 AC063977.5-201ENST00000601044 974 ntBASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 AC011453.2-201ENST00000603737 729 ntBASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 SLC2A3P2-201ENST00000331747 1480 ntBASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NEUROD4Q9HD90 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.24
NEUROD4Q9HD90 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
NEUROD4Q9HD90 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NEUROD4Q9HD90 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NEUROD4Q9HD90 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NEUROD4Q9HD90 EEF1A1P3-201ENST00000417549 1385 ntBASIC7.33□□□□□ -1.24
NEUROD4Q9HD90 EEF1A1P14-201ENST00000421195 1376 ntBASIC7.33□□□□□ -1.24
NEUROD4Q9HD90 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC7.33□□□□□ -1.24
NEUROD4Q9HD90 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NEUROD4Q9HD90 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
NEUROD4Q9HD90 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.33□□□□□ -1.24
NEUROD4Q9HD90 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC7.33□□□□□ -1.24
NEUROD4Q9HD90 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
NEUROD4Q9HD90 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.33□□□□□ -1.24
NEUROD4Q9HD90 AC104581.5-201ENST00000624171 7141 ntBASIC7.33□□□□□ -1.24
NEUROD4Q9HD90 AP003175.1-201ENST00000641383 6658 ntBASIC7.33□□□□□ -1.24
NEUROD4Q9HD90 SSXP3-201ENST00000442971 1300 ntBASIC7.33□□□□□ -1.24
NEUROD4Q9HD90 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NEUROD4Q9HD90 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NEUROD4Q9HD90 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NEUROD4Q9HD90 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NEUROD4Q9HD90 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms