Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 METTL15P3-201ENST00000415522 1221 ntBASIC6.1□□□□□ -1.43
PCDH9Q9HC56 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 AC098847.1-201ENST00000473094 348 ntBASIC6.1□□□□□ -1.43
PCDH9Q9HC56 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 IGKV3D-25-201ENST00000519599 235 ntBASIC6.1□□□□□ -1.43
PCDH9Q9HC56 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 AP001437.1-201ENST00000608783 456 ntBASIC6.1□□□□□ -1.43
PCDH9Q9HC56 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 AL445670.1-201ENST00000618889 801 ntBASIC6.1□□□□□ -1.43
PCDH9Q9HC56 AC241377.1-201ENST00000619797 406 ntBASIC6.1□□□□□ -1.43
PCDH9Q9HC56 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 AC073593.1-201ENST00000624500 411 ntBASIC6.1□□□□□ -1.43
PCDH9Q9HC56 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 AC008627.1-201ENST00000517511 1704 ntBASIC6.1□□□□□ -1.43
PCDH9Q9HC56 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 AC232271.1-201ENST00000602455 2715 ntBASIC6.1□□□□□ -1.43
PCDH9Q9HC56 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PCDH9Q9HC56 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCDH9Q9HC56 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
PCDH9Q9HC56 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCDH9Q9HC56 AC093225.1-201ENST00000506867 1408 ntBASIC6.09□□□□□ -1.43
PCDH9Q9HC56 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
PCDH9Q9HC56 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.09□□□□□ -1.43
PCDH9Q9HC56 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PCDH9Q9HC56 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.09□□□□□ -1.43
PCDH9Q9HC56 AC020656.2-201ENST00000613291 5309 ntBASIC6.09□□□□□ -1.43
PCDH9Q9HC56 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PCDH9Q9HC56 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
PCDH9Q9HC56 AC107977.1-201ENST00000355745 939 ntBASIC6.09□□□□□ -1.43
PCDH9Q9HC56 MIR130B-202ENST00000385018 82 ntBASIC6.09□□□□□ -1.43
PCDH9Q9HC56 RN7SKP279-201ENST00000411383 298 ntBASIC6.09□□□□□ -1.43
PCDH9Q9HC56 FAM204CP-201ENST00000424489 642 ntBASIC6.09□□□□□ -1.43
PCDH9Q9HC56 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDH9Q9HC56 AC096775.1-201ENST00000437724 448 ntBASIC6.09□□□□□ -1.43
PCDH9Q9HC56 AL663074.2-201ENST00000440621 479 ntBASIC6.09□□□□□ -1.43
PCDH9Q9HC56 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDH9Q9HC56 BTBD7P2-201ENST00000441962 620 ntBASIC6.09□□□□□ -1.43
PCDH9Q9HC56 RPS7P3-201ENST00000443360 580 ntBASIC6.09□□□□□ -1.43
PCDH9Q9HC56 AC128716.1-201ENST00000475129 166 ntBASIC6.09□□□□□ -1.43
PCDH9Q9HC56 RN7SL170P-201ENST00000487098 295 ntBASIC6.09□□□□□ -1.43
PCDH9Q9HC56 RN7SL284P-201ENST00000498823 275 ntBASIC6.09□□□□□ -1.43
PCDH9Q9HC56 RBBP4P1-201ENST00000502424 1276 ntBASIC6.09□□□□□ -1.43
PCDH9Q9HC56 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDH9Q9HC56 SNORD116-30-201ENST00000516468 85 ntBASIC6.09□□□□□ -1.43
PCDH9Q9HC56 RNU6-964P-201ENST00000516524 69 ntBASIC6.09□□□□□ -1.43
PCDH9Q9HC56 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.09□□□□□ -1.43
PCDH9Q9HC56 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.09□□□□□ -1.43
PCDH9Q9HC56 AC107958.1-201ENST00000556576 290 ntBASIC6.09□□□□□ -1.43
PCDH9Q9HC56 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDH9Q9HC56 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.09□□□□□ -1.43
PCDH9Q9HC56 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCDH9Q9HC56 AL391597.1-201ENST00000618707 694 ntBASIC6.09□□□□□ -1.43
PCDH9Q9HC56 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCDH9Q9HC56 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCDH9Q9HC56 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.09□□□□□ -1.43
PCDH9Q9HC56 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.09□□□□□ -1.44
PCDH9Q9HC56 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 AC093297.3-201ENST00000607056 2517 ntBASIC6.08□□□□□ -1.44
PCDH9Q9HC56 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 AC015799.1-201ENST00000622996 3122 ntBASIC6.08□□□□□ -1.44
PCDH9Q9HC56 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 SAMMSON-210ENST00000641260 1308 ntBASIC6.08□□□□□ -1.44
PCDH9Q9HC56 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 COX6B1P3-201ENST00000312310 260 ntBASIC6.08□□□□□ -1.44
PCDH9Q9HC56 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH9Q9HC56 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms