Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 ARMC4P1-201ENST00000438905 707 ntBASIC5.23□□□□□ -1.57
SSX3Q99909 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX3Q99909 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.23□□□□□ -1.57
SSX3Q99909 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.23□□□□□ -1.57
SSX3Q99909 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.23□□□□□ -1.57
SSX3Q99909 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX3Q99909 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.23□□□□□ -1.57
SSX3Q99909 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.23□□□□□ -1.57
SSX3Q99909 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX3Q99909 AC022336.1-201ENST00000475510 337 ntBASIC5.23□□□□□ -1.57
SSX3Q99909 RPL23AP68-201ENST00000480924 445 ntBASIC5.23□□□□□ -1.57
SSX3Q99909 OR9A1P-202ENST00000484361 945 ntBASIC5.23□□□□□ -1.57
SSX3Q99909 AC022206.1-201ENST00000495947 347 ntBASIC5.23□□□□□ -1.57
SSX3Q99909 AC122718.2-201ENST00000505325 591 ntBASIC5.23□□□□□ -1.57
SSX3Q99909 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.23□□□□□ -1.57
SSX3Q99909 RPS27AP18-201ENST00000515536 459 ntBASIC5.23□□□□□ -1.57
SSX3Q99909 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.23□□□□□ -1.57
SSX3Q99909 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX3Q99909 IGLV3-6-201ENST00000523937 250 ntBASIC5.23□□□□□ -1.57
SSX3Q99909 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX3Q99909 CYCSP25-201ENST00000525280 316 ntBASIC5.23□□□□□ -1.57
SSX3Q99909 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.23□□□□□ -1.57
SSX3Q99909 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.23□□□□□ -1.57
SSX3Q99909 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX3Q99909 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.23□□□□□ -1.57
SSX3Q99909 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.23□□□□□ -1.57
SSX3Q99909 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.23□□□□□ -1.57
SSX3Q99909 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.23□□□□□ -1.57
SSX3Q99909 AP001267.4-201ENST00000602598 545 ntBASIC5.23□□□□□ -1.57
SSX3Q99909 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.23□□□□□ -1.57
SSX3Q99909 AC015922.4-201ENST00000612568 690 ntBASIC5.23□□□□□ -1.57
SSX3Q99909 AC005393.1-201ENST00000617916 584 ntBASIC5.23□□□□□ -1.57
SSX3Q99909 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.23□□□□□ -1.57
SSX3Q99909 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.23□□□□□ -1.57
SSX3Q99909 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SSX3Q99909 RLIMP2-201ENST00000427891 1563 ntBASIC5.23□□□□□ -1.57
SSX3Q99909 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SSX3Q99909 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.23□□□□□ -1.57
SSX3Q99909 AL161756.3-201ENST00000641216 2071 ntBASIC5.23□□□□□ -1.57
SSX3Q99909 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SSX3Q99909 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.23□□□□□ -1.57
SSX3Q99909 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSX3Q99909 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSX3Q99909 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.23□□□□□ -1.57
SSX3Q99909 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.23□□□□□ -1.57
SSX3Q99909 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSX3Q99909 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSX3Q99909 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSX3Q99909 AL356317.1-201ENST00000396110 1436 ntBASIC5.23□□□□□ -1.57
SSX3Q99909 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSX3Q99909 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SSX3Q99909 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSX3Q99909 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SSX3Q99909 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SSX3Q99909 AL034546.1-201ENST00000623740 3693 ntBASIC5.22□□□□□ -1.57
SSX3Q99909 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.22□□□□□ -1.57
SSX3Q99909 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SSX3Q99909 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SSX3Q99909 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SSX3Q99909 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SSX3Q99909 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SSX3Q99909 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SSX3Q99909 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SSX3Q99909 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
SSX3Q99909 TTC39DP-201ENST00000416781 1688 ntBASIC5.22□□□□□ -1.57
SSX3Q99909 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SSX3Q99909 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SSX3Q99909 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
SSX3Q99909 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SSX3Q99909 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.22□□□□□ -1.57
SSX3Q99909 RN7SKP187-201ENST00000365536 330 ntBASIC5.22□□□□□ -1.57
SSX3Q99909 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.22□□□□□ -1.57
SSX3Q99909 RNA5SP105-201ENST00000391123 113 ntBASIC5.22□□□□□ -1.57
SSX3Q99909 AL050335.1-201ENST00000396909 869 ntBASIC5.22□□□□□ -1.57
SSX3Q99909 SNORA11.5-201ENST00000408163 128 ntBASIC5.22□□□□□ -1.57
SSX3Q99909 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.22□□□□□ -1.57
SSX3Q99909 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.22□□□□□ -1.57
SSX3Q99909 AL121878.1-201ENST00000418638 859 ntBASIC5.22□□□□□ -1.57
SSX3Q99909 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.22□□□□□ -1.57
SSX3Q99909 AC083862.1-201ENST00000427378 1242 ntBASIC5.22□□□□□ -1.57
SSX3Q99909 AC003989.1-201ENST00000434569 565 ntBASIC5.22□□□□□ -1.57
SSX3Q99909 RAD1P2-201ENST00000446414 663 ntBASIC5.22□□□□□ -1.57
SSX3Q99909 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.22□□□□□ -1.57
SSX3Q99909 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SSX3Q99909 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.22□□□□□ -1.57
SSX3Q99909 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.22□□□□□ -1.57
SSX3Q99909 SLC25A51P1-201ENST00000468432 871 ntBASIC5.22□□□□□ -1.57
SSX3Q99909 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.22□□□□□ -1.57
SSX3Q99909 H3F3AP5-201ENST00000475267 429 ntBASIC5.22□□□□□ -1.57
SSX3Q99909 OR7E22P-201ENST00000478335 1035 ntBASIC5.22□□□□□ -1.57
SSX3Q99909 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SSX3Q99909 PSMA2P2-201ENST00000504319 686 ntBASIC5.22□□□□□ -1.57
SSX3Q99909 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.22□□□□□ -1.57
SSX3Q99909 HMGN1P16-201ENST00000508308 283 ntBASIC5.22□□□□□ -1.57
SSX3Q99909 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.22□□□□□ -1.57
SSX3Q99909 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.22□□□□□ -1.57
SSX3Q99909 IGHV3-57-201ENST00000520143 280 ntBASIC5.22□□□□□ -1.57
SSX3Q99909 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.22□□□□□ -1.57
SSX3Q99909 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.22□□□□□ -1.57
SSX3Q99909 AC006272.2-201ENST00000594725 163 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms