Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 MRRFP1-201ENST00000435941 1675 ntBASIC8.53□□□□□ -1.04
TRIM47Q96LD4 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
TRIM47Q96LD4 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
TRIM47Q96LD4 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC8.52□□□□□ -1.04
TRIM47Q96LD4 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.04
TRIM47Q96LD4 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 RNA5SP114-201ENST00000363780 113 ntBASIC8.52□□□□□ -1.05
TRIM47Q96LD4 RNU4-51P-201ENST00000364206 140 ntBASIC8.52□□□□□ -1.05
TRIM47Q96LD4 RN7SKP187-201ENST00000365536 330 ntBASIC8.52□□□□□ -1.05
TRIM47Q96LD4 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 FAUP2-201ENST00000394301 401 ntBASIC8.52□□□□□ -1.05
TRIM47Q96LD4 VN1R12P-201ENST00000403778 876 ntBASIC8.52□□□□□ -1.05
TRIM47Q96LD4 AL033519.1-201ENST00000407266 307 ntBASIC8.52□□□□□ -1.05
TRIM47Q96LD4 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 AL121776.1-201ENST00000429337 372 ntBASIC8.52□□□□□ -1.05
TRIM47Q96LD4 PUDPP2-201ENST00000431423 643 ntBASIC8.52□□□□□ -1.05
TRIM47Q96LD4 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 YWHAZP7-201ENST00000436906 631 ntBASIC8.52□□□□□ -1.05
TRIM47Q96LD4 AC079781.1-201ENST00000441505 394 ntBASIC8.52□□□□□ -1.05
TRIM47Q96LD4 COX6CP2-201ENST00000444980 225 ntBASIC8.52□□□□□ -1.05
TRIM47Q96LD4 VN1R10P-201ENST00000447106 875 ntBASIC8.52□□□□□ -1.05
TRIM47Q96LD4 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 MED28P7-201ENST00000456611 530 ntBASIC8.52□□□□□ -1.05
TRIM47Q96LD4 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 RN7SL870P-201ENST00000460111 296 ntBASIC8.52□□□□□ -1.05
TRIM47Q96LD4 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 RPSAP37-201ENST00000470913 821 ntBASIC8.52□□□□□ -1.05
TRIM47Q96LD4 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 RN7SL350P-201ENST00000492591 299 ntBASIC8.52□□□□□ -1.05
TRIM47Q96LD4 SCARNA18.2-201ENST00000516882 84 ntBASIC8.52□□□□□ -1.05
TRIM47Q96LD4 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 OR6M3P-201ENST00000531567 700 ntBASIC8.52□□□□□ -1.05
TRIM47Q96LD4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 AC021483.2-201ENST00000567415 758 ntBASIC8.52□□□□□ -1.05
TRIM47Q96LD4 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 AL020997.3-201ENST00000602843 359 ntBASIC8.52□□□□□ -1.05
TRIM47Q96LD4 TEX41-293ENST00000630451 690 ntTSL 5 BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 AL356585.10-201ENST00000641883 123 ntBASIC8.52□□□□□ -1.05
TRIM47Q96LD4 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TRIM47Q96LD4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
TRIM47Q96LD4 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
TRIM47Q96LD4 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
TRIM47Q96LD4 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC8.51□□□□□ -1.05
TRIM47Q96LD4 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC8.51□□□□□ -1.05
TRIM47Q96LD4 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
TRIM47Q96LD4 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
TRIM47Q96LD4 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
TRIM47Q96LD4 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
TRIM47Q96LD4 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC8.51□□□□□ -1.05
TRIM47Q96LD4 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
TRIM47Q96LD4 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
TRIM47Q96LD4 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC8.51□□□□□ -1.05
TRIM47Q96LD4 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
TRIM47Q96LD4 RNU4-12P-201ENST00000365233 139 ntBASIC8.51□□□□□ -1.05
TRIM47Q96LD4 RNA5SP238-201ENST00000365464 120 ntBASIC8.51□□□□□ -1.05
TRIM47Q96LD4 SNORA75-201ENST00000384158 137 ntBASIC8.51□□□□□ -1.05
TRIM47Q96LD4 Y_RNA.548-201ENST00000384656 105 ntBASIC8.51□□□□□ -1.05
TRIM47Q96LD4 PDCL3P5-201ENST00000398028 722 ntBASIC8.51□□□□□ -1.05
TRIM47Q96LD4 CXADRP1-201ENST00000398098 1095 ntBASIC8.51□□□□□ -1.05
TRIM47Q96LD4 Z86062.1-201ENST00000406773 777 ntBASIC8.51□□□□□ -1.05
TRIM47Q96LD4 RPSAP72-201ENST00000407020 358 ntBASIC8.51□□□□□ -1.05
TRIM47Q96LD4 AL161631.1-201ENST00000417933 486 ntBASIC8.51□□□□□ -1.05
TRIM47Q96LD4 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC8.51□□□□□ -1.05
TRIM47Q96LD4 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms