Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 RN7SKP70-201ENST00000516655 271 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 RNA5SP278-201ENST00000517055 102 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AC023632.1-201ENST00000518463 375 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AC087752.2-201ENST00000521219 281 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 MTCYBP20-201ENST00000524239 1129 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 POLR2KP1-201ENST00000553226 168 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 MIR4732-201ENST00000581873 76 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AL590229.1-201ENST00000603497 542 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AC092354.2-201ENST00000607786 514 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AL353600.1-201ENST00000608148 251 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 MIR7109-201ENST00000613748 65 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 SNORA11.6-201ENST00000619030 128 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AC027559.1-201ENST00000636288 271 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 ABHD3-205ENST00000578270 2080 ntTSL 5 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 AL023806.3-201ENST00000638502 2704 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 OR4C1P-202ENST00000641065 1569 ntBASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NPAS4Q8IUM7 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 CASC19-206ENST00000641028 1430 ntBASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 AC011008.2-201ENST00000624866 3352 ntBASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 AC090771.1-201ENST00000585803 1618 ntBASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 RN7SKP149-201ENST00000363008 344 ntBASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 RNU4-4P-201ENST00000364588 130 ntBASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 SNORA64.3-201ENST00000365647 134 ntBASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 Y_RNA.604-201ENST00000410574 102 ntBASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 AC002069.1-201ENST00000429649 1159 ntBASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 AL365220.1-201ENST00000432923 399 ntBASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 AL354941.1-201ENST00000438600 464 ntBASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 AC092393.1-201ENST00000439625 742 ntBASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 MTND2P4-201ENST00000445034 1004 ntBASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 PRDX1P1-201ENST00000449329 596 ntBASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 RBMY2TP-201ENST00000451162 947 ntBASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 RNU7-27P-201ENST00000459281 62 ntBASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 NAA50-206ENST00000493454 964 ntTSL 2 BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 AC093755.1-201ENST00000512950 1023 ntBASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 RN7SKP196-201ENST00000516267 345 ntBASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 NRON-201ENST00000517270 370 ntBASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 AP000619.3-201ENST00000535634 1127 ntBASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 DUXAP1-201ENST00000556632 463 ntBASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 ULK4P2-202ENST00000564187 492 ntBASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
NPAS4Q8IUM7 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms