Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
CCDC27Q2M243 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC8.42□□□□□ -1.06
CCDC27Q2M243 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CCDC27Q2M243 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC8.42□□□□□ -1.06
CCDC27Q2M243 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
CCDC27Q2M243 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
CCDC27Q2M243 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CCDC27Q2M243 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CCDC27Q2M243 GPN3P1-201ENST00000423883 535 ntBASIC8.42□□□□□ -1.06
CCDC27Q2M243 OSTCP5-201ENST00000425293 453 ntBASIC8.42□□□□□ -1.06
CCDC27Q2M243 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC8.42□□□□□ -1.06
CCDC27Q2M243 AC005189.1-201ENST00000431286 310 ntBASIC8.42□□□□□ -1.06
CCDC27Q2M243 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC8.42□□□□□ -1.06
CCDC27Q2M243 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC8.42□□□□□ -1.06
CCDC27Q2M243 AL096803.2-201ENST00000450032 677 ntBASIC8.42□□□□□ -1.06
CCDC27Q2M243 Z95152.1-201ENST00000453556 656 ntBASIC8.42□□□□□ -1.06
CCDC27Q2M243 RN7SL836P-201ENST00000476140 296 ntBASIC8.42□□□□□ -1.06
CCDC27Q2M243 AC022206.1-201ENST00000495947 347 ntBASIC8.42□□□□□ -1.06
CCDC27Q2M243 AC010627.1-201ENST00000503819 1294 ntBASIC8.42□□□□□ -1.06
CCDC27Q2M243 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CCDC27Q2M243 AC138517.1-201ENST00000515724 568 ntBASIC8.42□□□□□ -1.06
CCDC27Q2M243 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC8.42□□□□□ -1.06
CCDC27Q2M243 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CCDC27Q2M243 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC8.42□□□□□ -1.06
CCDC27Q2M243 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CCDC27Q2M243 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC8.42□□□□□ -1.06
CCDC27Q2M243 AC037479.1-201ENST00000558361 625 ntBASIC8.42□□□□□ -1.06
CCDC27Q2M243 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
CCDC27Q2M243 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC8.42□□□□□ -1.06
CCDC27Q2M243 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC8.42□□□□□ -1.06
CCDC27Q2M243 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CCDC27Q2M243 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CCDC27Q2M243 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC8.42□□□□□ -1.06
CCDC27Q2M243 AC245100.2-201ENST00000454544 1679 ntBASIC8.42□□□□□ -1.06
CCDC27Q2M243 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CCDC27Q2M243 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CCDC27Q2M243 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CCDC27Q2M243 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CCDC27Q2M243 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
CCDC27Q2M243 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC27Q2M243 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC27Q2M243 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC27Q2M243 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC27Q2M243 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC27Q2M243 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC27Q2M243 MTND5P23-201ENST00000430812 1655 ntBASIC8.41□□□□□ -1.06
CCDC27Q2M243 FTO-215ENST00000636491 1676 ntTSL 5 BASIC8.41□□□□□ -1.06
CCDC27Q2M243 AC068733.2-201ENST00000605434 1418 ntBASIC8.41□□□□□ -1.06
CCDC27Q2M243 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC8.41□□□□□ -1.06
CCDC27Q2M243 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
CCDC27Q2M243 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
CCDC27Q2M243 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC27Q2M243 CHMP1B2P-201ENST00000399581 597 ntBASIC8.41□□□□□ -1.06
CCDC27Q2M243 RN7SKP129-201ENST00000410288 299 ntBASIC8.41□□□□□ -1.06
CCDC27Q2M243 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC8.41□□□□□ -1.06
CCDC27Q2M243 SLC4A1APP1-201ENST00000419995 602 ntBASIC8.41□□□□□ -1.06
CCDC27Q2M243 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC8.41□□□□□ -1.06
CCDC27Q2M243 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
CCDC27Q2M243 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
CCDC27Q2M243 AC245047.2-201ENST00000441060 530 ntBASIC8.41□□□□□ -1.06
CCDC27Q2M243 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC8.41□□□□□ -1.06
CCDC27Q2M243 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
CCDC27Q2M243 AC107398.1-201ENST00000486904 505 ntBASIC8.41□□□□□ -1.06
CCDC27Q2M243 AC026414.1-201ENST00000504046 698 ntBASIC8.41□□□□□ -1.06
CCDC27Q2M243 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC8.41□□□□□ -1.06
CCDC27Q2M243 BTG4P1-201ENST00000510421 183 ntBASIC8.41□□□□□ -1.06
CCDC27Q2M243 AC108120.2-201ENST00000512973 294 ntBASIC8.41□□□□□ -1.06
CCDC27Q2M243 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC8.41□□□□□ -1.06
CCDC27Q2M243 COX6B1P4-201ENST00000519826 484 ntBASIC8.41□□□□□ -1.06
CCDC27Q2M243 IGHV4-55-201ENST00000520889 368 ntBASIC8.41□□□□□ -1.06
CCDC27Q2M243 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC8.41□□□□□ -1.06
CCDC27Q2M243 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC8.41□□□□□ -1.06
CCDC27Q2M243 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC8.41□□□□□ -1.06
CCDC27Q2M243 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC8.41□□□□□ -1.06
CCDC27Q2M243 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC8.41□□□□□ -1.06
CCDC27Q2M243 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC8.41□□□□□ -1.06
CCDC27Q2M243 ZNF971P-201ENST00000562068 1249 ntBASIC8.41□□□□□ -1.06
CCDC27Q2M243 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC8.41□□□□□ -1.06
CCDC27Q2M243 AC233702.7-202ENST00000582941 211 ntBASIC8.41□□□□□ -1.06
CCDC27Q2M243 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC8.41□□□□□ -1.06
CCDC27Q2M243 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC8.41□□□□□ -1.06
CCDC27Q2M243 NIFKP6-201ENST00000598115 845 ntBASIC8.41□□□□□ -1.06
CCDC27Q2M243 AC005479.3-201ENST00000602790 431 ntBASIC8.41□□□□□ -1.06
CCDC27Q2M243 IGKV2OR2-1-201ENST00000605129 304 ntBASIC8.41□□□□□ -1.06
CCDC27Q2M243 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
CCDC27Q2M243 AC015819.1-201ENST00000613588 663 ntBASIC8.41□□□□□ -1.06
CCDC27Q2M243 TCL6_3.1-201ENST00000619064 137 ntBASIC8.41□□□□□ -1.06
CCDC27Q2M243 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC27Q2M243 MIR6813-201ENST00000621638 56 ntBASIC8.41□□□□□ -1.06
CCDC27Q2M243 AL132640.3-201ENST00000630473 177 ntBASIC8.41□□□□□ -1.06
CCDC27Q2M243 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC27Q2M243 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC27Q2M243 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC8.41□□□□□ -1.06
CCDC27Q2M243 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC27Q2M243 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
CCDC27Q2M243 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC8.41□□□□□ -1.06
CCDC27Q2M243 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC27Q2M243 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC27Q2M243 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC27Q2M243 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms