Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
HLA-DRB4X5D2U9 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DRB4X5D2U9 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
HLA-DRB4X5D2U9 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DRB4X5D2U9 AC114774.1-201ENST00000507410 1770 ntBASIC4.48□□□□□ -1.69
HLA-DRB4X5D2U9 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 U3.10-201ENST00000364459 214 ntBASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 RNA5SP279-201ENST00000365513 117 ntBASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 NMD3P2-201ENST00000421815 761 ntBASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 RPS3AP38-201ENST00000435889 763 ntBASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 RPSAP40-201ENST00000442343 891 ntBASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 RPL6P30-201ENST00000443382 862 ntBASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 CUBNP2-201ENST00000443534 1139 ntBASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AC009963.3-201ENST00000458090 486 ntBASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AC104164.1-201ENST00000460282 590 ntBASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AC092865.4-201ENST00000477936 615 ntBASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AC122718.2-201ENST00000505325 591 ntBASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 OR7E99P-201ENST00000505750 922 ntBASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AC018797.1-201ENST00000510791 255 ntBASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AP004609.2-201ENST00000532177 190 ntBASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AC092332.1-201ENST00000563684 829 ntBASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AL359091.2-201ENST00000609303 556 ntBASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AC005618.4-201ENST00000625053 554 ntBASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 RBMY1HP-201ENST00000382759 1389 ntBASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 AC239868.2-201ENST00000564237 4527 ntBASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HLA-DRB4X5D2U9 EEF1A1P30-201ENST00000429708 1315 ntBASIC4.46□□□□□ -1.69
HLA-DRB4X5D2U9 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC4.46□□□□□ -1.69
HLA-DRB4X5D2U9 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HLA-DRB4X5D2U9 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
HLA-DRB4X5D2U9 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
HLA-DRB4X5D2U9 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
HLA-DRB4X5D2U9 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HLA-DRB4X5D2U9 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 GNL2P1-201ENST00000451274 2190 ntBASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 RNA5SP110-201ENST00000362638 115 ntBASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 GCNT1P4-201ENST00000404096 329 ntBASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 SNORA77.2-201ENST00000408571 112 ntBASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 AC245096.1-201ENST00000413104 546 ntBASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 AC023141.3-201ENST00000436698 278 ntBASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 AC005165.2-201ENST00000466070 380 ntBASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 AC021006.1-201ENST00000489849 553 ntBASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 AL117692.1-201ENST00000494283 713 ntBASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 GLUD1P3-202ENST00000508551 200 ntBASIC4.46□□□□□ -1.7
HLA-DRB4X5D2U9 RN7SKP183-201ENST00000517169 324 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms