Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CCNG1P1-201ENST00000406783 885 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 RNA5SP498-201ENST00000411342 120 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 RPL12P27-201ENST00000414870 496 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 USP9YP13-201ENST00000417797 480 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 TIMM9P3-201ENST00000428659 274 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AC007559.1-201ENST00000428736 355 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 MTRF1-204ENST00000430347 557 ntTSL 5 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 OR51P1P-201ENST00000447547 942 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 BX248409.1-201ENST00000455497 255 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 RN7SL870P-201ENST00000460111 296 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 RPS20P23-201ENST00000461683 354 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AL031864.2-201ENST00000498507 350 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AC091951.2-201ENST00000500762 203 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 DUTP7-201ENST00000507982 486 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 PTGES3P3-201ENST00000511479 482 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AC084337.1-201ENST00000524809 686 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 OR6C73P-201ENST00000546432 358 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 DNM1P34-202ENST00000567850 315 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AC044792.1-201ENST00000593294 196 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AL049634.3-201ENST00000604968 457 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AC098614.4-201ENST00000607601 462 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AL592295.2-201ENST00000612578 206 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AC005332.6-201ENST00000613178 446 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AC074029.3-201ENST00000618623 312 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AC079228.1-201ENST00000624774 1049 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 CASC19-280ENST00000642102 1351 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 COL6A4P1-202ENST00000487147 4317 ntBASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC7.55□□□□□ -1.2
PCDHGA11Q9Y5H2 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 AL137918.1-201ENST00000624542 1922 ntBASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 TSSK4-201ENST00000287913 1257 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 FUNDC2P3-201ENST00000334716 533 ntBASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 SNORA71D-201ENST00000363484 134 ntBASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 EI24P3-201ENST00000399046 1062 ntBASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 NUS1P4-201ENST00000401550 585 ntBASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 AL009174.1-201ENST00000426577 416 ntBASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 AC016734.1-201ENST00000436998 654 ntBASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 SALL1P1-201ENST00000438101 3837 ntBASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 DPPA3P1-201ENST00000448050 469 ntBASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 snoU109.1-201ENST00000459339 135 ntBASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 RPL34P34-201ENST00000465389 354 ntBASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 NDUFS5P2-201ENST00000484004 306 ntBASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 RN7SL272P-201ENST00000487762 289 ntBASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7.54□□□□□ -1.2
PCDHGA11Q9Y5H2 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms