Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
COL21A1Q96P44 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL21A1Q96P44 AC027279.4-201ENST00000624371 2072 ntBASIC5.57□□□□□ -1.52
COL21A1Q96P44 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
COL21A1Q96P44 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL21A1Q96P44 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
COL21A1Q96P44 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL21A1Q96P44 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL21A1Q96P44 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL21A1Q96P44 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL21A1Q96P44 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 MIR130B-202ENST00000385018 82 ntBASIC5.56□□□□□ -1.52
COL21A1Q96P44 SEPT7P2-202ENST00000398921 823 ntBASIC5.56□□□□□ -1.52
COL21A1Q96P44 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 AL158827.1-201ENST00000416300 391 ntBASIC5.56□□□□□ -1.52
COL21A1Q96P44 NMD3P2-201ENST00000421815 761 ntBASIC5.56□□□□□ -1.52
COL21A1Q96P44 AC002069.1-201ENST00000429649 1159 ntBASIC5.56□□□□□ -1.52
COL21A1Q96P44 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 ATP5LP2-201ENST00000440646 311 ntBASIC5.56□□□□□ -1.52
COL21A1Q96P44 PPIAP27-201ENST00000453800 265 ntBASIC5.56□□□□□ -1.52
COL21A1Q96P44 AC023194.2-201ENST00000465398 406 ntBASIC5.56□□□□□ -1.52
COL21A1Q96P44 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 AP002884.1-201ENST00000479691 655 ntBASIC5.56□□□□□ -1.52
COL21A1Q96P44 IGKV3D-25-201ENST00000519599 235 ntBASIC5.56□□□□□ -1.52
COL21A1Q96P44 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 OR8Q1P-201ENST00000526467 655 ntBASIC5.56□□□□□ -1.52
COL21A1Q96P44 AP003396.4-201ENST00000527574 265 ntBASIC5.56□□□□□ -1.52
COL21A1Q96P44 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL21A1Q96P44 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 AC245014.3-201ENST00000618589 347 ntBASIC5.56□□□□□ -1.52
COL21A1Q96P44 AL357562.1-201ENST00000624911 609 ntBASIC5.56□□□□□ -1.52
COL21A1Q96P44 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 AC079776.5-201ENST00000641920 211 ntBASIC5.56□□□□□ -1.52
COL21A1Q96P44 LYARP1-201ENST00000436977 1501 ntBASIC5.56□□□□□ -1.52
COL21A1Q96P44 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL21A1Q96P44 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL21A1Q96P44 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL21A1Q96P44 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
COL21A1Q96P44 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 GNL2P1-201ENST00000451274 2190 ntBASIC5.56□□□□□ -1.52
COL21A1Q96P44 IFIT1P1-201ENST00000400497 1449 ntBASIC5.56□□□□□ -1.52
COL21A1Q96P44 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
COL21A1Q96P44 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
COL21A1Q96P44 NR1H5P-201ENST00000452683 1377 ntBASIC5.55□□□□□ -1.52
COL21A1Q96P44 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL21A1Q96P44 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
COL21A1Q96P44 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL21A1Q96P44 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
COL21A1Q96P44 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL21A1Q96P44 AC130304.1-201ENST00000622942 2385 ntBASIC5.55□□□□□ -1.52
COL21A1Q96P44 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
COL21A1Q96P44 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL21A1Q96P44 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL21A1Q96P44 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
COL21A1Q96P44 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
COL21A1Q96P44 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
COL21A1Q96P44 CXADRP1-201ENST00000398098 1095 ntBASIC5.55□□□□□ -1.52
COL21A1Q96P44 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.55□□□□□ -1.52
COL21A1Q96P44 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.55□□□□□ -1.52
COL21A1Q96P44 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.55□□□□□ -1.52
COL21A1Q96P44 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.55□□□□□ -1.52
COL21A1Q96P44 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
COL21A1Q96P44 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL21A1Q96P44 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.55□□□□□ -1.52
COL21A1Q96P44 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL21A1Q96P44 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.55□□□□□ -1.52
COL21A1Q96P44 AC079080.1-201ENST00000479841 822 ntBASIC5.55□□□□□ -1.52
COL21A1Q96P44 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.55□□□□□ -1.52
COL21A1Q96P44 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
COL21A1Q96P44 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.55□□□□□ -1.52
COL21A1Q96P44 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.55□□□□□ -1.52
COL21A1Q96P44 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.55□□□□□ -1.52
COL21A1Q96P44 RN7SKP238-201ENST00000516483 249 ntBASIC5.55□□□□□ -1.52
COL21A1Q96P44 RN7SKP70-201ENST00000516655 271 ntBASIC5.55□□□□□ -1.52
COL21A1Q96P44 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.55□□□□□ -1.52
COL21A1Q96P44 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.55□□□□□ -1.52
COL21A1Q96P44 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.55□□□□□ -1.52
COL21A1Q96P44 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.55□□□□□ -1.52
COL21A1Q96P44 RPA2P1-201ENST00000556557 721 ntBASIC5.55□□□□□ -1.52
COL21A1Q96P44 CYCSP38-201ENST00000559840 322 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms