Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC133644.2-201ENST00000608142 540 ntBASIC7.01□□□□□ -1.29
SNED1Q8TER0 AL049539.1-201ENST00000611964 459 ntBASIC7.01□□□□□ -1.29
SNED1Q8TER0 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
SNED1Q8TER0 AL390318.1-201ENST00000624564 687 ntBASIC7.01□□□□□ -1.29
SNED1Q8TER0 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SNED1Q8TER0 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
SNED1Q8TER0 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
SNED1Q8TER0 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
SNED1Q8TER0 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
SNED1Q8TER0 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
SNED1Q8TER0 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SNED1Q8TER0 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
SNED1Q8TER0 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7□□□□□ -1.29
SNED1Q8TER0 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
SNED1Q8TER0 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SNED1Q8TER0 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SNED1Q8TER0 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC7□□□□□ -1.29
SNED1Q8TER0 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC7□□□□□ -1.29
SNED1Q8TER0 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
SNED1Q8TER0 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SNED1Q8TER0 AC104162.1-201ENST00000430831 2382 ntBASIC7□□□□□ -1.29
SNED1Q8TER0 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
SNED1Q8TER0 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7□□□□□ -1.29
SNED1Q8TER0 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
SNED1Q8TER0 RNA5SP335-201ENST00000363817 110 ntBASIC7□□□□□ -1.29
SNED1Q8TER0 RN7SKP28-201ENST00000364770 305 ntBASIC7□□□□□ -1.29
SNED1Q8TER0 MIR130A-201ENST00000385274 89 ntBASIC7□□□□□ -1.29
SNED1Q8TER0 AC136624.1-201ENST00000400791 413 ntBASIC7□□□□□ -1.29
SNED1Q8TER0 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC7□□□□□ -1.29
SNED1Q8TER0 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC7□□□□□ -1.29
SNED1Q8TER0 RPS26P13-201ENST00000419030 330 ntBASIC7□□□□□ -1.29
SNED1Q8TER0 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC7□□□□□ -1.29
SNED1Q8TER0 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC7□□□□□ -1.29
SNED1Q8TER0 AL162739.1-201ENST00000450606 307 ntBASIC7□□□□□ -1.29
SNED1Q8TER0 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC7□□□□□ -1.29
SNED1Q8TER0 CYP4F27P-201ENST00000514557 494 ntBASIC7□□□□□ -1.29
SNED1Q8TER0 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
SNED1Q8TER0 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC7□□□□□ -1.29
SNED1Q8TER0 AL049779.2-201ENST00000553847 315 ntBASIC7□□□□□ -1.29
SNED1Q8TER0 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC7□□□□□ -1.29
SNED1Q8TER0 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC7□□□□□ -1.29
SNED1Q8TER0 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC7□□□□□ -1.29
SNED1Q8TER0 AC090510.2-201ENST00000617465 629 ntBASIC7□□□□□ -1.29
SNED1Q8TER0 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
SNED1Q8TER0 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SNED1Q8TER0 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SNED1Q8TER0 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
SNED1Q8TER0 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
SNED1Q8TER0 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.99□□□□□ -1.29
SNED1Q8TER0 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SNED1Q8TER0 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.99□□□□□ -1.29
SNED1Q8TER0 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
SNED1Q8TER0 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
SNED1Q8TER0 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.99□□□□□ -1.29
SNED1Q8TER0 MAPK10-338ENST00000641647 3362 ntBASIC6.99□□□□□ -1.29
SNED1Q8TER0 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SNED1Q8TER0 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.99□□□□□ -1.29
SNED1Q8TER0 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SNED1Q8TER0 THAP12P9-201ENST00000503971 2360 ntBASIC6.99□□□□□ -1.29
SNED1Q8TER0 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC6.99□□□□□ -1.29
SNED1Q8TER0 RNU1-77P-201ENST00000390868 162 ntBASIC6.99□□□□□ -1.29
SNED1Q8TER0 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.99□□□□□ -1.29
SNED1Q8TER0 RN7SKP213-201ENST00000410746 298 ntBASIC6.99□□□□□ -1.29
SNED1Q8TER0 RMRPP5-201ENST00000411156 267 ntBASIC6.99□□□□□ -1.29
SNED1Q8TER0 NIFKP3-201ENST00000417799 865 ntBASIC6.99□□□□□ -1.29
SNED1Q8TER0 AC108075.1-201ENST00000424692 529 ntBASIC6.99□□□□□ -1.29
SNED1Q8TER0 CYCSP6-201ENST00000434498 302 ntBASIC6.99□□□□□ -1.29
SNED1Q8TER0 VN1R54P-201ENST00000435210 1049 ntBASIC6.99□□□□□ -1.29
SNED1Q8TER0 OR6D1P-201ENST00000436165 939 ntBASIC6.99□□□□□ -1.29
SNED1Q8TER0 RPL15P21-201ENST00000495592 567 ntBASIC6.99□□□□□ -1.29
SNED1Q8TER0 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.99□□□□□ -1.29
SNED1Q8TER0 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC6.99□□□□□ -1.29
SNED1Q8TER0 AC004825.1-201ENST00000555068 586 ntBASIC6.99□□□□□ -1.29
SNED1Q8TER0 AC233699.1-201ENST00000569955 1168 ntBASIC6.99□□□□□ -1.29
SNED1Q8TER0 AC126915.2-201ENST00000610957 190 ntBASIC6.99□□□□□ -1.29
SNED1Q8TER0 AC132068.1-201ENST00000623805 459 ntBASIC6.99□□□□□ -1.29
SNED1Q8TER0 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
SNED1Q8TER0 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.99□□□□□ -1.29
SNED1Q8TER0 AC063923.1-201ENST00000478982 1619 ntBASIC6.99□□□□□ -1.29
SNED1Q8TER0 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.98□□□□□ -1.29
SNED1Q8TER0 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SNED1Q8TER0 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.98□□□□□ -1.29
SNED1Q8TER0 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
SNED1Q8TER0 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SNED1Q8TER0 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
SNED1Q8TER0 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SNED1Q8TER0 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
SNED1Q8TER0 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SNED1Q8TER0 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SNED1Q8TER0 MFSD8-219ENST00000641228 2559 ntBASIC6.98□□□□□ -1.29
SNED1Q8TER0 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SNED1Q8TER0 RNA5SP319-201ENST00000362768 119 ntBASIC6.98□□□□□ -1.29
SNED1Q8TER0 AC068138.1-201ENST00000412635 217 ntBASIC6.98□□□□□ -1.29
SNED1Q8TER0 AC019205.1-201ENST00000421830 730 ntBASIC6.98□□□□□ -1.29
SNED1Q8TER0 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.98□□□□□ -1.29
SNED1Q8TER0 PRUNEP1-201ENST00000425846 705 ntBASIC6.98□□□□□ -1.29
SNED1Q8TER0 AC023141.8-201ENST00000442554 208 ntBASIC6.98□□□□□ -1.29
SNED1Q8TER0 RPL7P45-201ENST00000455851 743 ntBASIC6.98□□□□□ -1.29
SNED1Q8TER0 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SNED1Q8TER0 AL121612.2-201ENST00000612261 482 ntBASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms