Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
TTC9CQ8N5M4 AC019322.1-201ENST00000571869 389 ntBASIC4.69□□□□□ -1.66
TTC9CQ8N5M4 MIR4502-201ENST00000580432 81 ntBASIC4.69□□□□□ -1.66
TTC9CQ8N5M4 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC4.69□□□□□ -1.66
TTC9CQ8N5M4 AL359091.2-201ENST00000609303 556 ntBASIC4.69□□□□□ -1.66
TTC9CQ8N5M4 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TTC9CQ8N5M4 Z95327.3-201ENST00000610385 572 ntBASIC4.69□□□□□ -1.66
TTC9CQ8N5M4 AP001052.1-201ENST00000626421 99 ntBASIC4.69□□□□□ -1.66
TTC9CQ8N5M4 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
TTC9CQ8N5M4 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.69□□□□□ -1.66
TTC9CQ8N5M4 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TTC9CQ8N5M4 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
TTC9CQ8N5M4 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TTC9CQ8N5M4 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TTC9CQ8N5M4 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.69□□□□□ -1.66
TTC9CQ8N5M4 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
TTC9CQ8N5M4 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TTC9CQ8N5M4 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC4.69□□□□□ -1.66
TTC9CQ8N5M4 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 QRSL1P1-201ENST00000400977 1540 ntBASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 MRRFP1-201ENST00000435941 1675 ntBASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 SNORA51.9-201ENST00000384295 124 ntBASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 RN7SKP17-201ENST00000411242 351 ntBASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 AL354766.1-201ENST00000423396 542 ntBASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 AL445928.1-201ENST00000435545 222 ntBASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 RPS7P3-201ENST00000443360 580 ntBASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 EEF1B2P3-201ENST00000447718 678 ntBASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 AC079080.1-201ENST00000479841 822 ntBASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 DEFB109A-201ENST00000482450 265 ntBASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 AC021006.1-201ENST00000489849 553 ntBASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 AC008629.2-201ENST00000503783 483 ntBASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 AC122718.2-201ENST00000505325 591 ntBASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 HSD3BP3-201ENST00000514706 994 ntBASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 AL845552.1-201ENST00000556820 323 ntBASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 AL163952.1-202ENST00000569625 600 ntBASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 AC005244.1-201ENST00000582566 339 ntBASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 AL049840.6-201ENST00000604583 345 ntBASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 TEX41-271ENST00000628213 993 ntTSL 5 BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 AL031595.2-201ENST00000624215 19071 ntBASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
TTC9CQ8N5M4 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 AL355488.2-201ENST00000609909 2850 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 MTCO1P7-201ENST00000419523 1542 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 MAPK10-338ENST00000641647 3362 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 AC008627.1-201ENST00000517511 1704 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 AC093225.1-201ENST00000506867 1408 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 RN7SKP171-201ENST00000364417 303 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 RPL35AP3-201ENST00000414680 288 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 GNG5P5-201ENST00000420444 220 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 USP24P1-201ENST00000433802 779 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 PNKDP1-201ENST00000435914 430 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 TUBB4BP6-201ENST00000437576 479 ntBASIC4.67□□□□□ -1.66
TTC9CQ8N5M4 AL663074.2-201ENST00000440621 479 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms