Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 NLRP3P1-201ENST00000622303 1785 ntBASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 SNORD1C-201ENST00000363315 78 ntBASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 AC245060.4-201ENST00000413293 1121 ntBASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 RPS29P14-201ENST00000431518 171 ntBASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 DEFA9P-201ENST00000433042 285 ntBASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 RPS3AP38-201ENST00000435889 763 ntBASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 BX679664.2-201ENST00000439282 283 ntBASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 AC023141.8-201ENST00000442554 208 ntBASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 UBFD1P1-201ENST00000473259 814 ntBASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 AC099521.1-201ENST00000482557 334 ntBASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 AC090568.1-201ENST00000509499 856 ntBASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 AC090424.1-201ENST00000535243 736 ntBASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 AP005431.1-201ENST00000618479 319 ntBASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 AL512356.3-201ENST00000623005 461 ntBASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 AC232271.1-201ENST00000602455 2715 ntBASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 AP001157.1-201ENST00000550837 2339 ntBASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 FBXL21-201ENST00000297158 1305 ntBASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 NEPNP-201ENST00000404786 1371 ntBASIC5.42□□□□□ -1.54
C9orf40Q8IXQ3 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 OR7E101P-201ENST00000400428 513 ntBASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 SNORA11.3-201ENST00000408471 128 ntBASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 AL390879.1-201ENST00000439143 386 ntBASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 AC015983.1-201ENST00000441577 373 ntBASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 AC073109.1-201ENST00000445066 978 ntBASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 AC004129.2-201ENST00000457229 287 ntBASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 EIF4EP5-201ENST00000528228 640 ntBASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 AP000619.2-201ENST00000546014 969 ntBASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 SNORA11.6-201ENST00000619030 128 ntBASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 AC022919.1-201ENST00000624979 626 ntBASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
C9orf40Q8IXQ3 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms