Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS13CQ709C8 GLRXP2-201ENST00000555594 321 ntBASIC4.52□□□□□ -1.69
VPS13CQ709C8 MIR4270-201ENST00000581799 70 ntBASIC4.52□□□□□ -1.69
VPS13CQ709C8 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VPS13CQ709C8 AL353763.1-201ENST00000624467 1628 ntBASIC4.52□□□□□ -1.69
VPS13CQ709C8 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
VPS13CQ709C8 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.52□□□□□ -1.69
VPS13CQ709C8 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
VPS13CQ709C8 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
VPS13CQ709C8 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VPS13CQ709C8 AL031123.3-201ENST00000623345 1837 ntBASIC4.52□□□□□ -1.69
VPS13CQ709C8 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.52□□□□□ -1.69
VPS13CQ709C8 RPL23AP72-201ENST00000492447 435 ntBASIC4.52□□□□□ -1.69
VPS13CQ709C8 AL512782.1-201ENST00000603093 364 ntBASIC4.52□□□□□ -1.69
VPS13CQ709C8 AL161616.1-201ENST00000611867 286 ntBASIC4.52□□□□□ -1.69
VPS13CQ709C8 AFF1-202ENST00000395146 9285 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
VPS13CQ709C8 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VPS13CQ709C8 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.52□□□□□ -1.69
VPS13CQ709C8 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VPS13CQ709C8 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS13CQ709C8 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS13CQ709C8 SALL1-201ENST00000251020 5146 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS13CQ709C8 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS13CQ709C8 KALRN-201ENST00000240874 6537 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS13CQ709C8 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS13CQ709C8 ZSCAN29-202ENST00000396976 5595 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS13CQ709C8 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
VPS13CQ709C8 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS13CQ709C8 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS13CQ709C8 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS13CQ709C8 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS13CQ709C8 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS13CQ709C8 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS13CQ709C8 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS13CQ709C8 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS13CQ709C8 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS13CQ709C8 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.51□□□□□ -1.69
VPS13CQ709C8 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS13CQ709C8 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS13CQ709C8 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS13CQ709C8 MICAL2-203ENST00000379612 6625 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS13CQ709C8 ATP6V1C1-201ENST00000395862 5612 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS13CQ709C8 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS13CQ709C8 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS13CQ709C8 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS13CQ709C8 MYH8-201ENST00000403437 6041 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
VPS13CQ709C8 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS13CQ709C8 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS13CQ709C8 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS13CQ709C8 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS13CQ709C8 AC027279.1-201ENST00000568885 4284 ntBASIC4.51□□□□□ -1.69
VPS13CQ709C8 ATP8B1-201ENST00000283684 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS13CQ709C8 PHACTR1-201ENST00000332995 5332 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
VPS13CQ709C8 SNHG14-208ENST00000453082 6087 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS13CQ709C8 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS13CQ709C8 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
VPS13CQ709C8 NPM1P40-201ENST00000412758 733 ntBASIC4.51□□□□□ -1.69
VPS13CQ709C8 AL513533.1-201ENST00000453728 415 ntBASIC4.51□□□□□ -1.69
VPS13CQ709C8 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC4.51□□□□□ -1.69
VPS13CQ709C8 MIR4277-201ENST00000578298 84 ntBASIC4.51□□□□□ -1.69
VPS13CQ709C8 AP000919.1-201ENST00000582850 985 ntBASIC4.51□□□□□ -1.69
VPS13CQ709C8 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS13CQ709C8 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS13CQ709C8 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS13CQ709C8 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS13CQ709C8 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS13CQ709C8 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS13CQ709C8 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
VPS13CQ709C8 AP000892.3-201ENST00000624094 5326 ntBASIC4.51□□□□□ -1.69
VPS13CQ709C8 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS13CQ709C8 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS13CQ709C8 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS13CQ709C8 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
VPS13CQ709C8 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
VPS13CQ709C8 AL138878.2-201ENST00000440581 1241 ntBASIC4.51□□□□□ -1.69
VPS13CQ709C8 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.51□□□□□ -1.69
VPS13CQ709C8 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS13CQ709C8 AC007494.1-201ENST00000562293 760 ntBASIC4.51□□□□□ -1.69
VPS13CQ709C8 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS13CQ709C8 AL731556.1-201ENST00000394628 3711 ntBASIC4.51□□□□□ -1.69
VPS13CQ709C8 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS13CQ709C8 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS13CQ709C8 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS13CQ709C8 AC026951.1-201ENST00000559530 2459 ntBASIC4.5□□□□□ -1.69
VPS13CQ709C8 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS13CQ709C8 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS13CQ709C8 FAM71F2-205ENST00000641605 5749 ntBASIC4.5□□□□□ -1.69
VPS13CQ709C8 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS13CQ709C8 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS13CQ709C8 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS13CQ709C8 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 AL022319.1-201ENST00000458183 1167 ntBASIC4.5□□□□□ -1.69
VPS13CQ709C8 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS13CQ709C8 RN7SL690P-201ENST00000582087 240 ntBASIC4.5□□□□□ -1.69
VPS13CQ709C8 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS13CQ709C8 AC009597.2-201ENST00000604659 592 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 236.9 ms