Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
PMS1P54277 AP003717.3-201ENST00000544832 1180 ntBASIC7.22□□□□□ -1.25
PMS1P54277 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC7.22□□□□□ -1.25
PMS1P54277 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
PMS1P54277 DUXAP6-201ENST00000553858 601 ntBASIC7.22□□□□□ -1.25
PMS1P54277 HNRNPA1P74-201ENST00000560782 835 ntBASIC7.22□□□□□ -1.25
PMS1P54277 AC021483.2-201ENST00000567415 758 ntBASIC7.22□□□□□ -1.25
PMS1P54277 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.22□□□□□ -1.25
PMS1P54277 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC7.22□□□□□ -1.25
PMS1P54277 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.22□□□□□ -1.25
PMS1P54277 AC090241.1-201ENST00000587732 621 ntBASIC7.22□□□□□ -1.25
PMS1P54277 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC7.22□□□□□ -1.25
PMS1P54277 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC7.22□□□□□ -1.25
PMS1P54277 AC119751.7-201ENST00000600494 245 ntBASIC7.22□□□□□ -1.25
PMS1P54277 AC005021.1-201ENST00000608730 355 ntBASIC7.22□□□□□ -1.25
PMS1P54277 AC090425.2-201ENST00000608818 501 ntBASIC7.22□□□□□ -1.25
PMS1P54277 AC092106.3-201ENST00000611308 722 ntBASIC7.22□□□□□ -1.25
PMS1P54277 MIR8082-201ENST00000612488 81 ntBASIC7.22□□□□□ -1.25
PMS1P54277 AC096708.4-201ENST00000620563 552 ntBASIC7.22□□□□□ -1.25
PMS1P54277 MRPL57P1-201ENST00000621486 265 ntBASIC7.22□□□□□ -1.25
PMS1P54277 GMFB-210ENST00000628554 639 ntTSL 4 BASIC7.22□□□□□ -1.25
PMS1P54277 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.22□□□□□ -1.25
PMS1P54277 AL121936.2-201ENST00000641935 662 ntBASIC7.22□□□□□ -1.25
PMS1P54277 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PMS1P54277 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PMS1P54277 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PMS1P54277 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PMS1P54277 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.22□□□□□ -1.25
PMS1P54277 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
PMS1P54277 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PMS1P54277 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
PMS1P54277 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.21□□□□□ -1.25
PMS1P54277 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
PMS1P54277 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.21□□□□□ -1.25
PMS1P54277 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
PMS1P54277 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
PMS1P54277 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
PMS1P54277 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
PMS1P54277 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
PMS1P54277 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
PMS1P54277 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
PMS1P54277 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
PMS1P54277 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
PMS1P54277 PPIAP24-201ENST00000328558 471 ntBASIC7.21□□□□□ -1.26
PMS1P54277 AC008549.2-201ENST00000333482 706 ntBASIC7.21□□□□□ -1.26
PMS1P54277 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.21□□□□□ -1.26
PMS1P54277 HMGB1P10-201ENST00000395823 563 ntBASIC7.21□□□□□ -1.26
PMS1P54277 RPL7P27-201ENST00000403775 720 ntBASIC7.21□□□□□ -1.26
PMS1P54277 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC7.21□□□□□ -1.26
PMS1P54277 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC7.21□□□□□ -1.26
PMS1P54277 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
PMS1P54277 ELOBP4-201ENST00000423418 296 ntBASIC7.21□□□□□ -1.26
PMS1P54277 AHCYP8-201ENST00000425108 209 ntBASIC7.21□□□□□ -1.26
PMS1P54277 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC7.21□□□□□ -1.26
PMS1P54277 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC7.21□□□□□ -1.26
PMS1P54277 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC7.21□□□□□ -1.26
PMS1P54277 AL356133.1-201ENST00000444762 372 ntBASIC7.21□□□□□ -1.26
PMS1P54277 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC7.21□□□□□ -1.26
PMS1P54277 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.21□□□□□ -1.26
PMS1P54277 AC079203.1-201ENST00000487972 404 ntBASIC7.21□□□□□ -1.26
PMS1P54277 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.21□□□□□ -1.26
PMS1P54277 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7.21□□□□□ -1.26
PMS1P54277 SCARNA5-201ENST00000516201 276 ntBASIC7.21□□□□□ -1.26
PMS1P54277 AC008429.2-201ENST00000523057 864 ntBASIC7.21□□□□□ -1.26
PMS1P54277 AC087373.1-201ENST00000524920 491 ntBASIC7.21□□□□□ -1.26
PMS1P54277 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PMS1P54277 GCSHP4-201ENST00000538792 439 ntBASIC7.21□□□□□ -1.26
PMS1P54277 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.21□□□□□ -1.26
PMS1P54277 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.21□□□□□ -1.26
PMS1P54277 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC7.21□□□□□ -1.26
PMS1P54277 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.21□□□□□ -1.26
PMS1P54277 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC7.21□□□□□ -1.26
PMS1P54277 AC107993.1-201ENST00000591343 684 ntBASIC7.21□□□□□ -1.26
PMS1P54277 AC124856.1-201ENST00000600819 896 ntBASIC7.21□□□□□ -1.26
PMS1P54277 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.21□□□□□ -1.26
PMS1P54277 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC7.21□□□□□ -1.26
PMS1P54277 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC7.21□□□□□ -1.26
PMS1P54277 RMST_5.1-201ENST00000618704 126 ntBASIC7.21□□□□□ -1.26
PMS1P54277 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PMS1P54277 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC7.21□□□□□ -1.26
PMS1P54277 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
PMS1P54277 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PMS1P54277 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
PMS1P54277 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PMS1P54277 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PMS1P54277 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PMS1P54277 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PMS1P54277 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
PMS1P54277 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
PMS1P54277 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PMS1P54277 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PMS1P54277 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.21□□□□□ -1.26
PMS1P54277 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PMS1P54277 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PMS1P54277 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
PMS1P54277 MTND4P5-201ENST00000435821 1374 ntBASIC7.2□□□□□ -1.26
PMS1P54277 UGT2B24P-201ENST00000514441 1597 ntBASIC7.2□□□□□ -1.26
PMS1P54277 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.2□□□□□ -1.26
PMS1P54277 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC7.2□□□□□ -1.26
PMS1P54277 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms