Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AL365220.1-201ENST00000432923 399 ntBASIC6.23□□□□□ -1.41
LHX1P48742 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.23□□□□□ -1.41
LHX1P48742 NXT1P1-201ENST00000458481 316 ntBASIC6.23□□□□□ -1.41
LHX1P48742 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.23□□□□□ -1.41
LHX1P48742 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.23□□□□□ -1.41
LHX1P48742 RPL38P3-201ENST00000484463 213 ntBASIC6.23□□□□□ -1.41
LHX1P48742 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.23□□□□□ -1.41
LHX1P48742 RPL7P51-201ENST00000490532 749 ntBASIC6.23□□□□□ -1.41
LHX1P48742 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.23□□□□□ -1.41
LHX1P48742 MTATP6P1-201ENST00000514057 681 ntBASIC6.23□□□□□ -1.41
LHX1P48742 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.23□□□□□ -1.41
LHX1P48742 AP001804.1-201ENST00000526868 919 ntBASIC6.23□□□□□ -1.41
LHX1P48742 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC6.23□□□□□ -1.41
LHX1P48742 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.23□□□□□ -1.41
LHX1P48742 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.23□□□□□ -1.41
LHX1P48742 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.23□□□□□ -1.41
LHX1P48742 AC132825.8-201ENST00000640783 297 ntBASIC6.23□□□□□ -1.41
LHX1P48742 OR13C1P-202ENST00000641378 2919 ntBASIC6.23□□□□□ -1.41
LHX1P48742 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LHX1P48742 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
LHX1P48742 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.23□□□□□ -1.41
LHX1P48742 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
LHX1P48742 OR4G1P-202ENST00000641173 1788 ntBASIC6.23□□□□□ -1.41
LHX1P48742 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
LHX1P48742 HSPD1P8-201ENST00000400121 1658 ntBASIC6.23□□□□□ -1.41
LHX1P48742 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.23□□□□□ -1.41
LHX1P48742 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.23□□□□□ -1.41
LHX1P48742 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LHX1P48742 TET1P1-201ENST00000426627 2301 ntBASIC6.22□□□□□ -1.41
LHX1P48742 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.22□□□□□ -1.41
LHX1P48742 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LHX1P48742 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LHX1P48742 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
LHX1P48742 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.22□□□□□ -1.41
LHX1P48742 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
LHX1P48742 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
LHX1P48742 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LHX1P48742 RPL23AP17-201ENST00000401064 499 ntBASIC6.22□□□□□ -1.41
LHX1P48742 AL451046.1-201ENST00000406097 534 ntBASIC6.22□□□□□ -1.41
LHX1P48742 SDHDP6-201ENST00000414693 480 ntBASIC6.22□□□□□ -1.41
LHX1P48742 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.22□□□□□ -1.41
LHX1P48742 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.22□□□□□ -1.41
LHX1P48742 AC019205.1-201ENST00000421830 730 ntBASIC6.22□□□□□ -1.41
LHX1P48742 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.22□□□□□ -1.41
LHX1P48742 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.22□□□□□ -1.41
LHX1P48742 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.22□□□□□ -1.41
LHX1P48742 AC093166.4-201ENST00000457867 318 ntBASIC6.22□□□□□ -1.41
LHX1P48742 AL157777.1-201ENST00000468100 304 ntBASIC6.22□□□□□ -1.41
LHX1P48742 UBFD1P1-201ENST00000473259 814 ntBASIC6.22□□□□□ -1.41
LHX1P48742 HMGB3P14-201ENST00000494195 599 ntBASIC6.22□□□□□ -1.41
LHX1P48742 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LHX1P48742 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LHX1P48742 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
LHX1P48742 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.22□□□□□ -1.41
LHX1P48742 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.22□□□□□ -1.41
LHX1P48742 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.22□□□□□ -1.41
LHX1P48742 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.22□□□□□ -1.41
LHX1P48742 AP005431.1-201ENST00000618479 319 ntBASIC6.22□□□□□ -1.41
LHX1P48742 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.22□□□□□ -1.41
LHX1P48742 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LHX1P48742 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LHX1P48742 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
LHX1P48742 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
LHX1P48742 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LHX1P48742 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LHX1P48742 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
LHX1P48742 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LHX1P48742 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LHX1P48742 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
LHX1P48742 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
LHX1P48742 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.41
LHX1P48742 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.21□□□□□ -1.41
LHX1P48742 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.21□□□□□ -1.41
LHX1P48742 SNX18P3-202ENST00000565670 1750 ntBASIC6.21□□□□□ -1.41
LHX1P48742 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
LHX1P48742 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
LHX1P48742 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
LHX1P48742 DNM1P47-203ENST00000571780 12667 ntBASIC6.21□□□□□ -1.41
LHX1P48742 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
LHX1P48742 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LHX1P48742 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
LHX1P48742 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.21□□□□□ -1.42
LHX1P48742 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LHX1P48742 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LHX1P48742 SNORA17A-201ENST00000391185 133 ntBASIC6.21□□□□□ -1.42
LHX1P48742 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LHX1P48742 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.21□□□□□ -1.42
LHX1P48742 BX119321.1-201ENST00000428912 797 ntBASIC6.21□□□□□ -1.42
LHX1P48742 NPM1P25-201ENST00000429734 854 ntBASIC6.21□□□□□ -1.42
LHX1P48742 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.21□□□□□ -1.42
LHX1P48742 AL390879.1-201ENST00000439143 386 ntBASIC6.21□□□□□ -1.42
LHX1P48742 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC6.21□□□□□ -1.42
LHX1P48742 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.21□□□□□ -1.42
LHX1P48742 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.21□□□□□ -1.42
LHX1P48742 SLC25A51P1-201ENST00000468432 871 ntBASIC6.21□□□□□ -1.42
LHX1P48742 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.21□□□□□ -1.42
LHX1P48742 OR51A1P-201ENST00000511110 946 ntBASIC6.21□□□□□ -1.42
LHX1P48742 CYCSP22-201ENST00000517555 339 ntBASIC6.21□□□□□ -1.42
LHX1P48742 IGLVIV-64-201ENST00000518581 301 ntBASIC6.21□□□□□ -1.42
LHX1P48742 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 163.2 ms