Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXA9P31269 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXA9P31269 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXA9P31269 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.18□□□□□ -1.42
HOXA9P31269 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HOXA9P31269 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXA9P31269 AC006600.2-201ENST00000624834 2506 ntBASIC6.18□□□□□ -1.42
HOXA9P31269 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.17□□□□□ -1.42
HOXA9P31269 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXA9P31269 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
HOXA9P31269 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXA9P31269 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
HOXA9P31269 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXA9P31269 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXA9P31269 AC007114.2-201ENST00000576014 4281 ntBASIC6.17□□□□□ -1.42
HOXA9P31269 LINC01616-201ENST00000561816 2280 ntBASIC6.17□□□□□ -1.42
HOXA9P31269 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXA9P31269 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HOXA9P31269 DEFA9P-201ENST00000433042 285 ntBASIC6.17□□□□□ -1.42
HOXA9P31269 RPL7L1P3-201ENST00000455249 689 ntBASIC6.17□□□□□ -1.42
HOXA9P31269 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXA9P31269 HMGB1P42-201ENST00000532126 553 ntBASIC6.17□□□□□ -1.42
HOXA9P31269 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXA9P31269 AL049872.1-201ENST00000556323 322 ntBASIC6.17□□□□□ -1.42
HOXA9P31269 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.17□□□□□ -1.42
HOXA9P31269 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXA9P31269 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.17□□□□□ -1.42
HOXA9P31269 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.17□□□□□ -1.42
HOXA9P31269 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXA9P31269 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXA9P31269 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXA9P31269 AC079395.2-201ENST00000610982 737 ntBASIC6.17□□□□□ -1.42
HOXA9P31269 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXA9P31269 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.17□□□□□ -1.42
HOXA9P31269 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXA9P31269 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXA9P31269 NCOA4P2-201ENST00000340589 1813 ntBASIC6.17□□□□□ -1.42
HOXA9P31269 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.17□□□□□ -1.42
HOXA9P31269 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
HOXA9P31269 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXA9P31269 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXA9P31269 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.17□□□□□ -1.42
HOXA9P31269 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXA9P31269 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.16□□□□□ -1.42
HOXA9P31269 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
HOXA9P31269 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXA9P31269 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HOXA9P31269 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.16□□□□□ -1.42
HOXA9P31269 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXA9P31269 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.16□□□□□ -1.42
HOXA9P31269 AP000547.3-204ENST00000588548 2523 ntBASIC6.16□□□□□ -1.42
HOXA9P31269 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXA9P31269 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXA9P31269 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HOXA9P31269 RN7SKP162-201ENST00000363605 345 ntBASIC6.16□□□□□ -1.42
HOXA9P31269 RN7SKP124-201ENST00000364730 341 ntBASIC6.16□□□□□ -1.42
HOXA9P31269 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXA9P31269 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXA9P31269 AC079922.1-201ENST00000443291 359 ntBASIC6.16□□□□□ -1.42
HOXA9P31269 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXA9P31269 FRG2FP-204ENST00000453982 852 ntBASIC6.16□□□□□ -1.42
HOXA9P31269 RN7SL165P-201ENST00000477476 291 ntBASIC6.16□□□□□ -1.42
HOXA9P31269 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.16□□□□□ -1.42
HOXA9P31269 DUTP7-201ENST00000507982 486 ntBASIC6.16□□□□□ -1.42
HOXA9P31269 NRBF2P4-201ENST00000520874 850 ntBASIC6.16□□□□□ -1.42
HOXA9P31269 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXA9P31269 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXA9P31269 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXA9P31269 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
HOXA9P31269 AC016180.1-201ENST00000567945 403 ntBASIC6.16□□□□□ -1.42
HOXA9P31269 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.16□□□□□ -1.42
HOXA9P31269 TXNP4-201ENST00000575018 310 ntBASIC6.16□□□□□ -1.42
HOXA9P31269 MIR1273E-201ENST00000581165 102 ntBASIC6.16□□□□□ -1.42
HOXA9P31269 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXA9P31269 SDR42E1P1-201ENST00000611327 477 ntBASIC6.16□□□□□ -1.42
HOXA9P31269 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXA9P31269 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXA9P31269 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXA9P31269 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
HOXA9P31269 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
HOXA9P31269 THAP12P9-201ENST00000503971 2360 ntBASIC6.16□□□□□ -1.42
HOXA9P31269 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.16□□□□□ -1.42
HOXA9P31269 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXA9P31269 AL022323.4-201ENST00000623980 13120 ntBASIC6.16□□□□□ -1.42
HOXA9P31269 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
HOXA9P31269 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXA9P31269 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
HOXA9P31269 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
HOXA9P31269 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXA9P31269 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXA9P31269 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
HOXA9P31269 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.15□□□□□ -1.42
HOXA9P31269 AC005225.5-201ENST00000623547 2225 ntBASIC6.15□□□□□ -1.42
HOXA9P31269 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXA9P31269 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.15□□□□□ -1.42
HOXA9P31269 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
HOXA9P31269 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HOXA9P31269 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXA9P31269 AC068769.1-201ENST00000474767 2426 ntBASIC6.15□□□□□ -1.42
HOXA9P31269 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms