Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC3.44□□□□□ -1.86
APOBP04114 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.44□□□□□ -1.86
APOBP04114 AC011497.2-201ENST00000600255 639 ntBASIC3.44□□□□□ -1.86
APOBP04114 NANOGP3-201ENST00000605855 286 ntBASIC3.44□□□□□ -1.86
APOBP04114 AC090607.5-201ENST00000615692 224 ntBASIC3.44□□□□□ -1.86
APOBP04114 WWOX-217ENST00000620008 450 ntTSL 2 BASIC3.44□□□□□ -1.86
APOBP04114 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 DPYSL2-201ENST00000311151 4603 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 AL078621.3-201ENST00000623707 2042 ntBASIC3.44□□□□□ -1.86
APOBP04114 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
APOBP04114 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC3.44□□□□□ -1.86
APOBP04114 PLD5-208ENST00000536534 8721 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
APOBP04114 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
APOBP04114 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
APOBP04114 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
APOBP04114 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
APOBP04114 MIR133B-201ENST00000362210 119 ntBASIC3.43□□□□□ -1.86
APOBP04114 RN7SKP227-201ENST00000364445 330 ntBASIC3.43□□□□□ -1.86
APOBP04114 MIR23A-201ENST00000385245 73 ntBASIC3.43□□□□□ -1.86
APOBP04114 GAPDHP42-201ENST00000406848 981 ntBASIC3.43□□□□□ -1.86
APOBP04114 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.43□□□□□ -1.86
APOBP04114 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC3.43□□□□□ -1.86
APOBP04114 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.43□□□□□ -1.86
APOBP04114 AC021006.3-201ENST00000530771 192 ntBASIC3.43□□□□□ -1.86
APOBP04114 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.43□□□□□ -1.86
APOBP04114 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
APOBP04114 MIR8089-201ENST00000620165 82 ntBASIC3.43□□□□□ -1.86
APOBP04114 AL161637.1-201ENST00000622380 412 ntBASIC3.43□□□□□ -1.86
APOBP04114 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
APOBP04114 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC3.43□□□□□ -1.86
APOBP04114 EML5-201ENST00000380664 5910 ntTSL 5 BASIC3.43□□□□□ -1.86
APOBP04114 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
APOBP04114 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
APOBP04114 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
APOBP04114 MECP2-201ENST00000303391 10505 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
APOBP04114 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
APOBP04114 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
APOBP04114 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
APOBP04114 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC3.43□□□□□ -1.86
APOBP04114 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC3.43□□□□□ -1.86
APOBP04114 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
APOBP04114 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.43□□□□□ -1.86
APOBP04114 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
APOBP04114 DNAJA1P4-201ENST00000406473 1166 ntBASIC3.43□□□□□ -1.86
APOBP04114 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC3.43□□□□□ -1.86
APOBP04114 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
APOBP04114 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.43□□□□□ -1.86
APOBP04114 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC3.43□□□□□ -1.86
APOBP04114 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC3.43□□□□□ -1.86
APOBP04114 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
APOBP04114 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC3.43□□□□□ -1.86
APOBP04114 AP005403.1-201ENST00000579720 229 ntBASIC3.43□□□□□ -1.86
APOBP04114 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.43□□□□□ -1.86
APOBP04114 AC091193.1-201ENST00000604640 448 ntBASIC3.43□□□□□ -1.86
APOBP04114 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
APOBP04114 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
APOBP04114 JAKMIP2-206ENST00000616793 9272 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
APOBP04114 AP000542.3-201ENST00000623391 6114 ntBASIC3.43□□□□□ -1.86
APOBP04114 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
APOBP04114 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
APOBP04114 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC3.43□□□□□ -1.86
APOBP04114 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
APOBP04114 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC3.43□□□□□ -1.86
APOBP04114 AC091046.3-201ENST00000631455 1574 ntBASIC3.43□□□□□ -1.86
APOBP04114 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
APOBP04114 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC3.43□□□□□ -1.86
APOBP04114 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
APOBP04114 GPR161-210ENST00000546300 7388 ntTSL 2 BASIC3.43□□□□□ -1.86
APOBP04114 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
APOBP04114 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
APOBP04114 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
APOBP04114 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
APOBP04114 RN7SKP6-201ENST00000364795 319 ntBASIC3.43□□□□□ -1.86
APOBP04114 AC093414.1-201ENST00000434712 514 ntBASIC3.43□□□□□ -1.86
APOBP04114 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.43□□□□□ -1.86
APOBP04114 CYCSP42-201ENST00000450823 238 ntBASIC3.43□□□□□ -1.86
APOBP04114 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC3.43□□□□□ -1.86
APOBP04114 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC3.43□□□□□ -1.86
APOBP04114 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.43□□□□□ -1.86
APOBP04114 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
APOBP04114 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
APOBP04114 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
APOBP04114 PABPC1P8-201ENST00000452851 2086 ntBASIC3.43□□□□□ -1.86
APOBP04114 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
APOBP04114 AP002991.2-201ENST00000623807 2801 ntBASIC3.43□□□□□ -1.86
APOBP04114 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC3.43□□□□□ -1.86
APOBP04114 UTY-203ENST00000362096 4990 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
APOBP04114 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
APOBP04114 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
APOBP04114 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
APOBP04114 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
APOBP04114 TNRC6C-202ENST00000335749 9740 ntAPPRIS P4 TSL 5 BASIC3.43□□□□□ -1.86
APOBP04114 CEP63-202ENST00000337090 5632 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
APOBP04114 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
APOBP04114 AC114774.1-201ENST00000507410 1770 ntBASIC3.43□□□□□ -1.86
APOBP04114 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
APOBP04114 TPT1-204ENST00000379060 764 ntTSL 5 BASIC3.43□□□□□ -1.86
APOBP04114 SNORA67-201ENST00000384423 137 ntBASIC3.43□□□□□ -1.86
APOBP04114 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms