Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
TMEM88BA6NKF7 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
TMEM88BA6NKF7 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
TMEM88BA6NKF7 ZNF649-201ENST00000354957 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
TMEM88BA6NKF7 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
TMEM88BA6NKF7 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC8.1□□□□□ -1.11
TMEM88BA6NKF7 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
TMEM88BA6NKF7 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
TMEM88BA6NKF7 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 ERC1-213ENST00000543086 9241 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 LYARP1-201ENST00000436977 1501 ntBASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 EEF1A1P21-201ENST00000512363 1344 ntBASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AC138393.1-206ENST00000540997 1886 ntBASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 MT-TP-201ENST00000387461 68 ntBASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 MIR937-201ENST00000401271 86 ntBASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 NUDT19P3-201ENST00000404698 555 ntBASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 RNA5SP498-201ENST00000411342 120 ntBASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AC004074.1-201ENST00000421810 1063 ntBASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AL354707.3-201ENST00000427308 331 ntBASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 DEFA9P-201ENST00000433042 285 ntBASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AL590128.1-201ENST00000433407 286 ntBASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 RNU6-759P-201ENST00000516740 103 ntBASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AC124293.1-201ENST00000530034 493 ntBASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AC016839.1-201ENST00000578162 867 ntBASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 TEX41-218ENST00000596540 882 ntTSL 5 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 VN1R82P-201ENST00000601481 356 ntBASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AC006539.2-201ENST00000601729 572 ntBASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AC100767.2-201ENST00000604840 693 ntBASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AL590032.1-201ENST00000604920 252 ntBASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AC010738.1-201ENST00000604970 987 ntBASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AC072039.2-201ENST00000608883 439 ntBASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AL159169.2-201ENST00000610061 1269 ntBASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AL592148.2-201ENST00000612210 372 ntBASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AL359757.1-201ENST00000623176 255 ntBASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 FP325313.1-201ENST00000638228 703 ntBASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 MFSD8-245ENST00000641743 948 ntBASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 RBM5-201ENST00000347869 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 AL512329.1-201ENST00000404600 1592 ntBASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 CASC19-281ENST00000642118 1554 ntBASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 SLC10A7-201ENST00000335472 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
TMEM88BA6NKF7 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
TMEM88BA6NKF7 AC245505.2-201ENST00000553572 3055 ntBASIC8.09□□□□□ -1.12
TMEM88BA6NKF7 BRDT-204ENST00000394530 3207 ntTSL 2 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 DLG2-218ENST00000524982 2872 ntTSL 2 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 FTO-222ENST00000637969 2889 ntTSL 5 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 TTC39DP-201ENST00000416781 1688 ntBASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 AC005539.1-201ENST00000443768 1479 ntBASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TMEM88BA6NKF7 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms