Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MIR6731-201ENST00000614863 72 ntBASIC4.4□□□□□ -1.71
AP1S3Q96PC3 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 MIR6732-201ENST00000619365 60 ntBASIC4.4□□□□□ -1.71
AP1S3Q96PC3 MIR6811-201ENST00000620409 58 ntBASIC4.4□□□□□ -1.71
AP1S3Q96PC3 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 MBD5-221ENST00000637159 902 ntTSL 5 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 AC139713.2-215ENST00000641428 5037 ntBASIC4.4□□□□□ -1.71
AP1S3Q96PC3 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 OFD1P15Y-201ENST00000411536 1392 ntBASIC4.4□□□□□ -1.71
AP1S3Q96PC3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
AP1S3Q96PC3 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 AC004023.1-201ENST00000561473 1744 ntBASIC4.39□□□□□ -1.71
AP1S3Q96PC3 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 U3.7-201ENST00000363668 216 ntBASIC4.39□□□□□ -1.71
AP1S3Q96PC3 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 TPT1-204ENST00000379060 764 ntTSL 5 BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 SNORA7A-201ENST00000384765 139 ntBASIC4.39□□□□□ -1.71
AP1S3Q96PC3 MIR188-201ENST00000385034 86 ntBASIC4.39□□□□□ -1.71
AP1S3Q96PC3 RN7SKP144-201ENST00000411108 279 ntBASIC4.39□□□□□ -1.71
AP1S3Q96PC3 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 GPN3P1-201ENST00000423883 535 ntBASIC4.39□□□□□ -1.71
AP1S3Q96PC3 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 AC112492.2-201ENST00000432774 1030 ntBASIC4.39□□□□□ -1.71
AP1S3Q96PC3 NPM1P23-201ENST00000440193 849 ntBASIC4.39□□□□□ -1.71
AP1S3Q96PC3 RPS10P14-201ENST00000440748 502 ntBASIC4.39□□□□□ -1.71
AP1S3Q96PC3 GTF2IP14-201ENST00000441415 586 ntBASIC4.39□□□□□ -1.71
AP1S3Q96PC3 POU5F1P5-201ENST00000445059 658 ntBASIC4.39□□□□□ -1.71
AP1S3Q96PC3 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 KHDC1P1-201ENST00000511053 508 ntBASIC4.39□□□□□ -1.71
AP1S3Q96PC3 IGLV3-24-201ENST00000517477 197 ntBASIC4.39□□□□□ -1.71
AP1S3Q96PC3 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 CYCSP25-201ENST00000525280 316 ntBASIC4.39□□□□□ -1.71
AP1S3Q96PC3 AC130366.1-201ENST00000526505 1192 ntBASIC4.39□□□□□ -1.71
AP1S3Q96PC3 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 ZNF322P1-201ENST00000568013 1209 ntBASIC4.39□□□□□ -1.71
AP1S3Q96PC3 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 AC107993.1-201ENST00000591343 684 ntBASIC4.39□□□□□ -1.71
AP1S3Q96PC3 AC006115.2-201ENST00000596823 202 ntBASIC4.39□□□□□ -1.71
AP1S3Q96PC3 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC4.39□□□□□ -1.71
AP1S3Q96PC3 MIR6726-201ENST00000613751 61 ntBASIC4.39□□□□□ -1.71
AP1S3Q96PC3 AL139407.1-201ENST00000613826 1175 ntBASIC4.39□□□□□ -1.71
AP1S3Q96PC3 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC4.39□□□□□ -1.71
AP1S3Q96PC3 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 AP003108.4-201ENST00000623917 878 ntBASIC4.39□□□□□ -1.71
AP1S3Q96PC3 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 ASB8-218ENST00000629941 278 ntTSL 5 BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 AC099654.15-201ENST00000639802 509 ntBASIC4.39□□□□□ -1.71
AP1S3Q96PC3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
AP1S3Q96PC3 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 RBPJP7-201ENST00000442803 1447 ntBASIC4.38□□□□□ -1.71
AP1S3Q96PC3 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
AP1S3Q96PC3 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms