Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
LRCH3Q96II8 AC145207.5-201ENST00000582866 2682 ntBASIC8.62□□□□□ -1.03
LRCH3Q96II8 ABCA11P-202ENST00000504019 2110 ntBASIC8.62□□□□□ -1.03
LRCH3Q96II8 UBAP2L-202ENST00000343815 3411 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
LRCH3Q96II8 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 AC127537.1-201ENST00000418183 748 ntBASIC8.62□□□□□ -1.03
LRCH3Q96II8 EEF1A1P34-201ENST00000419888 1267 ntBASIC8.62□□□□□ -1.03
LRCH3Q96II8 RPS27AP14-201ENST00000422868 454 ntBASIC8.62□□□□□ -1.03
LRCH3Q96II8 SETP9-201ENST00000423837 832 ntBASIC8.62□□□□□ -1.03
LRCH3Q96II8 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 RPL29P7-201ENST00000440227 457 ntBASIC8.62□□□□□ -1.03
LRCH3Q96II8 GOT2P2-201ENST00000450663 1251 ntBASIC8.62□□□□□ -1.03
LRCH3Q96II8 FABP3P2-201ENST00000453169 399 ntBASIC8.62□□□□□ -1.03
LRCH3Q96II8 Y_RNA.632-201ENST00000459189 102 ntBASIC8.62□□□□□ -1.03
LRCH3Q96II8 RPL7P19-201ENST00000469948 618 ntBASIC8.62□□□□□ -1.03
LRCH3Q96II8 AC023598.1-201ENST00000472521 361 ntBASIC8.62□□□□□ -1.03
LRCH3Q96II8 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
LRCH3Q96II8 RN7SL335P-201ENST00000482790 304 ntBASIC8.62□□□□□ -1.03
LRCH3Q96II8 ACTG1P13-201ENST00000486987 1043 ntBASIC8.62□□□□□ -1.03
LRCH3Q96II8 HSPD1P18-201ENST00000504252 244 ntBASIC8.62□□□□□ -1.03
LRCH3Q96II8 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 CA1-215ENST00000522389 551 ntTSL 3 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 AL020996.2-202ENST00000527604 334 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 AL117190.2-201ENST00000554041 289 ntTSL 2 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 AC018638.8-201ENST00000588755 281 ntBASIC8.62□□□□□ -1.03
LRCH3Q96II8 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 PRR13P5-201ENST00000596581 442 ntBASIC8.62□□□□□ -1.03
LRCH3Q96II8 AL031281.2-201ENST00000606754 748 ntBASIC8.62□□□□□ -1.03
LRCH3Q96II8 AC114546.4-201ENST00000624413 369 ntBASIC8.62□□□□□ -1.03
LRCH3Q96II8 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 CD36-214ENST00000447544 2298 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 LSM5-208ENST00000450169 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LRCH3Q96II8 STAT4-201ENST00000358470 2769 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LRCH3Q96II8 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
LRCH3Q96II8 CASP8-205ENST00000358485 2930 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
LRCH3Q96II8 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LRCH3Q96II8 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
LRCH3Q96II8 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LRCH3Q96II8 ULBP1-201ENST00000229708 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LRCH3Q96II8 METTL7A-203ENST00000548553 4076 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LRCH3Q96II8 CTAGE9-201ENST00000314099 2334 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 DNAH10-209ENST00000614082 3484 ntTSL 5 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LRCH3Q96II8 AP001528.3-201ENST00000624364 3249 ntBASIC8.61□□□□□ -1.03
LRCH3Q96II8 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 NECAP1-210ENST00000638237 2517 ntAPPRIS ALT1 TSL 5 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 EEF1A1P14-201ENST00000421195 1376 ntBASIC8.61□□□□□ -1.03
LRCH3Q96II8 LAMA3-207ENST00000587184 5007 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LRCH3Q96II8 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LRCH3Q96II8 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LRCH3Q96II8 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
LRCH3Q96II8 ZKSCAN3-202ENST00000341464 1794 ntTSL 2 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LRCH3Q96II8 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
LRCH3Q96II8 ARHGEF9-201ENST00000253401 5413 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LRCH3Q96II8 AL731563.3-201ENST00000608005 3005 ntTSL 2 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 GLI1-201ENST00000228682 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LRCH3Q96II8 Y_RNA.315-201ENST00000365117 102 ntBASIC8.61□□□□□ -1.03
LRCH3Q96II8 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 Y_RNA.452-201ENST00000384202 108 ntBASIC8.61□□□□□ -1.03
LRCH3Q96II8 YWHAZP6-201ENST00000399764 738 ntBASIC8.61□□□□□ -1.03
LRCH3Q96II8 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 CBX3P6-201ENST00000430257 527 ntBASIC8.61□□□□□ -1.03
LRCH3Q96II8 AL389925.1-201ENST00000432257 728 ntBASIC8.61□□□□□ -1.03
LRCH3Q96II8 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 UBE2FP3-201ENST00000436366 524 ntBASIC8.61□□□□□ -1.03
LRCH3Q96II8 HMGB1P16-201ENST00000447155 540 ntBASIC8.61□□□□□ -1.03
LRCH3Q96II8 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 CECR9-201ENST00000453421 199 ntBASIC8.61□□□□□ -1.03
LRCH3Q96II8 RN7SL251P-201ENST00000464175 297 ntBASIC8.61□□□□□ -1.03
LRCH3Q96II8 RPL7L1P7-201ENST00000509986 724 ntBASIC8.61□□□□□ -1.03
LRCH3Q96II8 AC010368.1-201ENST00000510160 456 ntBASIC8.61□□□□□ -1.03
LRCH3Q96II8 AC026412.2-201ENST00000512270 1075 ntBASIC8.61□□□□□ -1.03
LRCH3Q96II8 SNORA31.13-201ENST00000516624 135 ntBASIC8.61□□□□□ -1.03
LRCH3Q96II8 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 AC008429.2-201ENST00000523057 864 ntBASIC8.61□□□□□ -1.03
LRCH3Q96II8 AP000879.2-201ENST00000530525 497 ntTSL 3 BASIC8.61□□□□□ -1.03
LRCH3Q96II8 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms