Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 RN7SL104P-201ENST00000498686 293 ntBASIC4.56□□□□□ -1.68
HIST1H1AQ02539 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 AC111000.6-201ENST00000514471 709 ntBASIC4.56□□□□□ -1.68
HIST1H1AQ02539 NATP-201ENST00000523491 878 ntBASIC4.56□□□□□ -1.68
HIST1H1AQ02539 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 NPIPB14P-203ENST00000532298 987 ntBASIC4.56□□□□□ -1.68
HIST1H1AQ02539 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 RPSAP75-201ENST00000605848 301 ntBASIC4.56□□□□□ -1.68
HIST1H1AQ02539 AC141002.1-201ENST00000607025 279 ntBASIC4.56□□□□□ -1.68
HIST1H1AQ02539 AL591167.1-201ENST00000607321 456 ntBASIC4.56□□□□□ -1.68
HIST1H1AQ02539 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC4.56□□□□□ -1.68
HIST1H1AQ02539 MIR6774-201ENST00000614651 70 ntBASIC4.56□□□□□ -1.68
HIST1H1AQ02539 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HIST1H1AQ02539 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 OR10R3P-201ENST00000361688 942 ntBASIC4.55□□□□□ -1.68
HIST1H1AQ02539 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 SNORA77.2-201ENST00000408571 112 ntBASIC4.55□□□□□ -1.68
HIST1H1AQ02539 RN7SKP166-201ENST00000410812 305 ntBASIC4.55□□□□□ -1.68
HIST1H1AQ02539 AC079809.1-201ENST00000415468 276 ntBASIC4.55□□□□□ -1.68
HIST1H1AQ02539 PTCD2P2-201ENST00000415579 1095 ntBASIC4.55□□□□□ -1.68
HIST1H1AQ02539 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 CCNB1IP1P1-201ENST00000428976 839 ntBASIC4.55□□□□□ -1.68
HIST1H1AQ02539 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 USP24P1-201ENST00000433802 779 ntBASIC4.55□□□□□ -1.68
HIST1H1AQ02539 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 PFN2-209ENST00000481275 560 ntTSL 4 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 RPL34P33-201ENST00000486062 334 ntBASIC4.55□□□□□ -1.68
HIST1H1AQ02539 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 SNX18P25-201ENST00000510539 758 ntBASIC4.55□□□□□ -1.68
HIST1H1AQ02539 AC090958.1-201ENST00000511122 351 ntBASIC4.55□□□□□ -1.68
HIST1H1AQ02539 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 AC138517.1-201ENST00000515724 568 ntBASIC4.55□□□□□ -1.68
HIST1H1AQ02539 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 AC068993.1-201ENST00000546724 589 ntBASIC4.55□□□□□ -1.68
HIST1H1AQ02539 AC005632.2-201ENST00000564271 828 ntBASIC4.55□□□□□ -1.68
HIST1H1AQ02539 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 MIR4660-201ENST00000583549 74 ntBASIC4.55□□□□□ -1.68
HIST1H1AQ02539 WBP1LP11-201ENST00000586141 328 ntBASIC4.55□□□□□ -1.68
HIST1H1AQ02539 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 OSTC-205ENST00000613215 876 ntTSL 2 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 AC024884.1-201ENST00000620583 399 ntBASIC4.55□□□□□ -1.68
HIST1H1AQ02539 AL138693.1-201ENST00000622219 129 ntBASIC4.55□□□□□ -1.68
HIST1H1AQ02539 AC103703.1-201ENST00000634783 663 ntBASIC4.55□□□□□ -1.68
HIST1H1AQ02539 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 AC083843.2-201ENST00000568248 6253 ntBASIC4.55□□□□□ -1.68
HIST1H1AQ02539 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 THAP12P9-201ENST00000503971 2360 ntBASIC4.55□□□□□ -1.68
HIST1H1AQ02539 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HIST1H1AQ02539 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms