Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC004477.3-201ENST00000614061 590 ntBASIC6.5□□□□□ -1.37
CLCN3P51790 AL139099.4-201ENST00000614802 114 ntBASIC6.5□□□□□ -1.37
CLCN3P51790 AC132825.8-201ENST00000640783 297 ntBASIC6.5□□□□□ -1.37
CLCN3P51790 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CLCN3P51790 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.5□□□□□ -1.37
CLCN3P51790 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CLCN3P51790 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CLCN3P51790 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CLCN3P51790 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.5□□□□□ -1.37
CLCN3P51790 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CLCN3P51790 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.5□□□□□ -1.37
CLCN3P51790 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CLCN3P51790 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.5□□□□□ -1.37
CLCN3P51790 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CLCN3P51790 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.5□□□□□ -1.37
CLCN3P51790 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CLCN3P51790 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.49□□□□□ -1.37
CLCN3P51790 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
CLCN3P51790 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.49□□□□□ -1.37
CLCN3P51790 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CLCN3P51790 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CLCN3P51790 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CLCN3P51790 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CLCN3P51790 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CLCN3P51790 TRAV35-201ENST00000390462 330 ntBASIC6.49□□□□□ -1.37
CLCN3P51790 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CLCN3P51790 HMGA1P8-201ENST00000414130 321 ntBASIC6.49□□□□□ -1.37
CLCN3P51790 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.49□□□□□ -1.37
CLCN3P51790 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.49□□□□□ -1.37
CLCN3P51790 CYP4F27P-201ENST00000514557 494 ntBASIC6.49□□□□□ -1.37
CLCN3P51790 RNU6-551P-201ENST00000516661 103 ntBASIC6.49□□□□□ -1.37
CLCN3P51790 CYCSP22-201ENST00000517555 339 ntBASIC6.49□□□□□ -1.37
CLCN3P51790 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CLCN3P51790 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.49□□□□□ -1.37
CLCN3P51790 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.49□□□□□ -1.37
CLCN3P51790 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CLCN3P51790 MIR4301-201ENST00000577203 66 ntBASIC6.49□□□□□ -1.37
CLCN3P51790 AP001496.3-201ENST00000580230 913 ntBASIC6.49□□□□□ -1.37
CLCN3P51790 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.49□□□□□ -1.37
CLCN3P51790 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.49□□□□□ -1.37
CLCN3P51790 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.49□□□□□ -1.37
CLCN3P51790 AC145423.1-201ENST00000605712 336 ntBASIC6.49□□□□□ -1.37
CLCN3P51790 AL352984.2-201ENST00000611153 546 ntBASIC6.49□□□□□ -1.37
CLCN3P51790 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.49□□□□□ -1.37
CLCN3P51790 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.49□□□□□ -1.37
CLCN3P51790 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CLCN3P51790 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CLCN3P51790 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CLCN3P51790 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.49□□□□□ -1.37
CLCN3P51790 MTCO1P11-201ENST00000429111 1528 ntBASIC6.49□□□□□ -1.37
CLCN3P51790 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CLCN3P51790 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CLCN3P51790 AL731532.1-201ENST00000623972 4236 ntBASIC6.49□□□□□ -1.37
CLCN3P51790 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CLCN3P51790 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CLCN3P51790 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.48□□□□□ -1.37
CLCN3P51790 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CLCN3P51790 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.48□□□□□ -1.37
CLCN3P51790 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.48□□□□□ -1.37
CLCN3P51790 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.48□□□□□ -1.37
CLCN3P51790 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
CLCN3P51790 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CLCN3P51790 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CLCN3P51790 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CLCN3P51790 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CLCN3P51790 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.48□□□□□ -1.37
CLCN3P51790 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
CLCN3P51790 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CLCN3P51790 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CLCN3P51790 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CLCN3P51790 RNA5SP394-201ENST00000364216 119 ntBASIC6.48□□□□□ -1.37
CLCN3P51790 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CLCN3P51790 AC005522.1-201ENST00000395416 346 ntBASIC6.48□□□□□ -1.37
CLCN3P51790 RN7SKP229-201ENST00000410465 302 ntBASIC6.48□□□□□ -1.37
CLCN3P51790 AK4P4-201ENST00000419465 646 ntBASIC6.48□□□□□ -1.37
CLCN3P51790 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.48□□□□□ -1.37
CLCN3P51790 AC117434.1-201ENST00000419971 836 ntBASIC6.48□□□□□ -1.37
CLCN3P51790 AC016027.5-201ENST00000427227 210 ntBASIC6.48□□□□□ -1.37
CLCN3P51790 BX119904.3-201ENST00000428194 957 ntBASIC6.48□□□□□ -1.37
CLCN3P51790 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.48□□□□□ -1.37
CLCN3P51790 RPSAP37-201ENST00000470913 821 ntBASIC6.48□□□□□ -1.37
CLCN3P51790 AC099521.1-201ENST00000482557 334 ntBASIC6.48□□□□□ -1.37
CLCN3P51790 RPL38P3-201ENST00000484463 213 ntBASIC6.48□□□□□ -1.37
CLCN3P51790 RN7SL284P-201ENST00000498823 275 ntBASIC6.48□□□□□ -1.37
CLCN3P51790 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.48□□□□□ -1.37
CLCN3P51790 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.48□□□□□ -1.37
CLCN3P51790 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.48□□□□□ -1.37
CLCN3P51790 RNU4-18P-201ENST00000516751 149 ntBASIC6.48□□□□□ -1.37
CLCN3P51790 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.48□□□□□ -1.37
CLCN3P51790 DPPA3P2-201ENST00000553589 478 ntBASIC6.48□□□□□ -1.37
CLCN3P51790 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.48□□□□□ -1.37
CLCN3P51790 AC010547.6-201ENST00000571789 193 ntBASIC6.48□□□□□ -1.37
CLCN3P51790 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6.48□□□□□ -1.37
CLCN3P51790 FAM72A-208ENST00000607379 1139 ntBASIC6.48□□□□□ -1.37
CLCN3P51790 AC022919.1-201ENST00000624979 626 ntBASIC6.48□□□□□ -1.37
CLCN3P51790 CFTRP2-201ENST00000634304 199 ntBASIC6.48□□□□□ -1.37
CLCN3P51790 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.48□□□□□ -1.37
CLCN3P51790 AC087565.3-203ENST00000641018 837 ntBASIC6.48□□□□□ -1.37
CLCN3P51790 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CLCN3P51790 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms