Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
BRCC3P46736 AP002833.3-201ENST00000625075 2265 ntBASIC6.26□□□□□ -1.41
BRCC3P46736 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
BRCC3P46736 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
BRCC3P46736 AL451046.1-201ENST00000406097 534 ntBASIC6.26□□□□□ -1.41
BRCC3P46736 OR2W4P-201ENST00000406496 926 ntBASIC6.26□□□□□ -1.41
BRCC3P46736 SDHDP6-201ENST00000414693 480 ntBASIC6.26□□□□□ -1.41
BRCC3P46736 RPL34P3-201ENST00000421454 338 ntBASIC6.26□□□□□ -1.41
BRCC3P46736 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.26□□□□□ -1.41
BRCC3P46736 AC023141.8-201ENST00000442554 208 ntBASIC6.26□□□□□ -1.41
BRCC3P46736 DNAJC19P5-201ENST00000443295 316 ntBASIC6.26□□□□□ -1.41
BRCC3P46736 PFN1P6-201ENST00000476786 399 ntBASIC6.26□□□□□ -1.41
BRCC3P46736 RPL38P3-201ENST00000484463 213 ntBASIC6.26□□□□□ -1.41
BRCC3P46736 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.26□□□□□ -1.41
BRCC3P46736 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.26□□□□□ -1.41
BRCC3P46736 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.26□□□□□ -1.41
BRCC3P46736 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.26□□□□□ -1.41
BRCC3P46736 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
BRCC3P46736 OR4A42P-201ENST00000531397 938 ntBASIC6.26□□□□□ -1.41
BRCC3P46736 AC022404.1-201ENST00000555320 273 ntBASIC6.26□□□□□ -1.41
BRCC3P46736 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
BRCC3P46736 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.26□□□□□ -1.41
BRCC3P46736 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.26□□□□□ -1.41
BRCC3P46736 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.26□□□□□ -1.41
BRCC3P46736 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.26□□□□□ -1.41
BRCC3P46736 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.26□□□□□ -1.41
BRCC3P46736 MIR6768-201ENST00000610734 72 ntBASIC6.26□□□□□ -1.41
BRCC3P46736 AC109309.2-201ENST00000612597 332 ntBASIC6.26□□□□□ -1.41
BRCC3P46736 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.26□□□□□ -1.41
BRCC3P46736 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.26□□□□□ -1.41
BRCC3P46736 AL049767.1-202ENST00000637826 242 ntBASIC6.26□□□□□ -1.41
BRCC3P46736 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
BRCC3P46736 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
BRCC3P46736 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
BRCC3P46736 AC087565.3-203ENST00000641018 837 ntBASIC6.26□□□□□ -1.41
BRCC3P46736 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
BRCC3P46736 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
BRCC3P46736 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
BRCC3P46736 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.26□□□□□ -1.41
BRCC3P46736 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
BRCC3P46736 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
BRCC3P46736 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.26□□□□□ -1.41
BRCC3P46736 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
BRCC3P46736 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
BRCC3P46736 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
BRCC3P46736 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.25□□□□□ -1.41
BRCC3P46736 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
BRCC3P46736 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
BRCC3P46736 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
BRCC3P46736 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
BRCC3P46736 ZNF402P-201ENST00000404435 3100 ntBASIC6.25□□□□□ -1.41
BRCC3P46736 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
BRCC3P46736 SNORA64.1-201ENST00000362600 132 ntBASIC6.25□□□□□ -1.41
BRCC3P46736 U3.25-201ENST00000391209 220 ntBASIC6.25□□□□□ -1.41
BRCC3P46736 HMGA1P8-201ENST00000414130 321 ntBASIC6.25□□□□□ -1.41
BRCC3P46736 AC016027.5-201ENST00000427227 210 ntBASIC6.25□□□□□ -1.41
BRCC3P46736 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.25□□□□□ -1.41
BRCC3P46736 DEFA9P-201ENST00000433042 285 ntBASIC6.25□□□□□ -1.41
BRCC3P46736 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.25□□□□□ -1.41
BRCC3P46736 AL603882.1-201ENST00000463059 681 ntBASIC6.25□□□□□ -1.41
BRCC3P46736 AC109481.1-201ENST00000509173 282 ntBASIC6.25□□□□□ -1.41
BRCC3P46736 RPL7L1P4-201ENST00000513004 707 ntBASIC6.25□□□□□ -1.41
BRCC3P46736 RNA5SP362-201ENST00000516048 118 ntBASIC6.25□□□□□ -1.41
BRCC3P46736 SNORA43.3-201ENST00000517240 103 ntBASIC6.25□□□□□ -1.41
BRCC3P46736 DPPA2P4-201ENST00000563717 878 ntBASIC6.25□□□□□ -1.41
BRCC3P46736 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
BRCC3P46736 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.25□□□□□ -1.41
BRCC3P46736 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.25□□□□□ -1.41
BRCC3P46736 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.25□□□□□ -1.41
BRCC3P46736 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
BRCC3P46736 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.25□□□□□ -1.41
BRCC3P46736 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
BRCC3P46736 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
BRCC3P46736 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
BRCC3P46736 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
BRCC3P46736 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
BRCC3P46736 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
BRCC3P46736 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
BRCC3P46736 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
BRCC3P46736 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
BRCC3P46736 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.25□□□□□ -1.41
BRCC3P46736 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
BRCC3P46736 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
BRCC3P46736 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.24□□□□□ -1.41
BRCC3P46736 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.24□□□□□ -1.41
BRCC3P46736 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.24□□□□□ -1.41
BRCC3P46736 TTC41P-205ENST00000551270 3963 ntBASIC6.24□□□□□ -1.41
BRCC3P46736 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
BRCC3P46736 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.24□□□□□ -1.41
BRCC3P46736 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
BRCC3P46736 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.24□□□□□ -1.41
BRCC3P46736 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.24□□□□□ -1.41
BRCC3P46736 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
BRCC3P46736 AL357752.1-201ENST00000412817 349 ntBASIC6.24□□□□□ -1.41
BRCC3P46736 GAPDHP48-201ENST00000436626 961 ntBASIC6.24□□□□□ -1.41
BRCC3P46736 AC002504.1-201ENST00000438281 691 ntBASIC6.24□□□□□ -1.41
BRCC3P46736 EEF1B2P6-201ENST00000445713 673 ntBASIC6.24□□□□□ -1.41
BRCC3P46736 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.24□□□□□ -1.41
BRCC3P46736 SNORA81.2-201ENST00000516868 170 ntBASIC6.24□□□□□ -1.41
BRCC3P46736 SCARNA6.1-201ENST00000516989 238 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms