Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD3DP04234 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CD3DP04234 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CD3DP04234 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD3DP04234 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.83□□□□□ -1.64
CD3DP04234 AC083899.1-201ENST00000454465 3819 ntBASIC4.83□□□□□ -1.64
CD3DP04234 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.83□□□□□ -1.64
CD3DP04234 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.82□□□□□ -1.64
CD3DP04234 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD3DP04234 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.82□□□□□ -1.64
CD3DP04234 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.82□□□□□ -1.64
CD3DP04234 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CD3DP04234 MTCO1P28-201ENST00000574177 1528 ntBASIC4.82□□□□□ -1.64
CD3DP04234 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CD3DP04234 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CD3DP04234 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD3DP04234 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD3DP04234 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.82□□□□□ -1.64
CD3DP04234 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD3DP04234 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CD3DP04234 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD3DP04234 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.82□□□□□ -1.64
CD3DP04234 RNU1-134P-201ENST00000362935 165 ntBASIC4.82□□□□□ -1.64
CD3DP04234 RNA5SP431-201ENST00000410312 120 ntBASIC4.82□□□□□ -1.64
CD3DP04234 AL138479.1-201ENST00000426913 484 ntBASIC4.82□□□□□ -1.64
CD3DP04234 PCBP2P1-201ENST00000437262 977 ntBASIC4.82□□□□□ -1.64
CD3DP04234 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC4.82□□□□□ -1.64
CD3DP04234 AC092106.1-201ENST00000444291 373 ntBASIC4.82□□□□□ -1.64
CD3DP04234 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.82□□□□□ -1.64
CD3DP04234 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC4.82□□□□□ -1.64
CD3DP04234 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC4.82□□□□□ -1.64
CD3DP04234 TAAR4P-201ENST00000454843 1039 ntBASIC4.82□□□□□ -1.64
CD3DP04234 PSAT1P4-201ENST00000466500 526 ntBASIC4.82□□□□□ -1.64
CD3DP04234 AC023245.1-201ENST00000468501 517 ntBASIC4.82□□□□□ -1.64
CD3DP04234 AC021193.1-201ENST00000511607 420 ntBASIC4.82□□□□□ -1.64
CD3DP04234 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.82□□□□□ -1.64
CD3DP04234 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
CD3DP04234 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC4.82□□□□□ -1.64
CD3DP04234 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC4.82□□□□□ -1.64
CD3DP04234 AC079064.1-201ENST00000528365 362 ntBASIC4.82□□□□□ -1.64
CD3DP04234 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC4.82□□□□□ -1.64
CD3DP04234 LDHC-203ENST00000535809 757 ntTSL 5 BASIC4.82□□□□□ -1.64
CD3DP04234 AC122688.1-201ENST00000541494 223 ntBASIC4.82□□□□□ -1.64
CD3DP04234 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC4.82□□□□□ -1.64
CD3DP04234 NIFKP4-201ENST00000567275 1192 ntBASIC4.82□□□□□ -1.64
CD3DP04234 RPSAP75-201ENST00000605848 301 ntBASIC4.82□□□□□ -1.64
CD3DP04234 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.82□□□□□ -1.64
CD3DP04234 AL139099.4-201ENST00000614802 114 ntBASIC4.82□□□□□ -1.64
CD3DP04234 AC026367.3-201ENST00000619032 590 ntBASIC4.82□□□□□ -1.64
CD3DP04234 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.82□□□□□ -1.64
CD3DP04234 AC138965.3-201ENST00000623875 498 ntBASIC4.82□□□□□ -1.64
CD3DP04234 AC073488.3-201ENST00000631611 778 ntBASIC4.82□□□□□ -1.64
CD3DP04234 OR11H2-202ENST00000641517 1085 ntBASIC4.82□□□□□ -1.64
CD3DP04234 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD3DP04234 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD3DP04234 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
CD3DP04234 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CD3DP04234 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.82□□□□□ -1.64
CD3DP04234 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.82□□□□□ -1.64
CD3DP04234 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CD3DP04234 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CD3DP04234 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD3DP04234 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD3DP04234 AC012254.3-201ENST00000591183 2117 ntBASIC4.81□□□□□ -1.64
CD3DP04234 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD3DP04234 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.81□□□□□ -1.64
CD3DP04234 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.81□□□□□ -1.64
CD3DP04234 RN7SKP77-201ENST00000363261 353 ntBASIC4.81□□□□□ -1.64
CD3DP04234 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC4.81□□□□□ -1.64
CD3DP04234 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CD3DP04234 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CD3DP04234 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.81□□□□□ -1.64
CD3DP04234 THEM7P-201ENST00000419556 672 ntBASIC4.81□□□□□ -1.64
CD3DP04234 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.81□□□□□ -1.64
CD3DP04234 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.81□□□□□ -1.64
CD3DP04234 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD3DP04234 SLC25A24P1-202ENST00000434803 1220 ntBASIC4.81□□□□□ -1.64
CD3DP04234 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.81□□□□□ -1.64
CD3DP04234 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.81□□□□□ -1.64
CD3DP04234 NPM1P9-201ENST00000453156 844 ntBASIC4.81□□□□□ -1.64
CD3DP04234 AL354872.1-201ENST00000456361 967 ntBASIC4.81□□□□□ -1.64
CD3DP04234 RPL12P24-201ENST00000474907 486 ntBASIC4.81□□□□□ -1.64
CD3DP04234 EIF3LP3-201ENST00000495197 822 ntBASIC4.81□□□□□ -1.64
CD3DP04234 SNX18P25-201ENST00000510539 758 ntBASIC4.81□□□□□ -1.64
CD3DP04234 OSTC-204ENST00000512478 663 ntTSL 5 BASIC4.81□□□□□ -1.64
CD3DP04234 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.81□□□□□ -1.64
CD3DP04234 AC036111.2-201ENST00000533247 901 ntBASIC4.81□□□□□ -1.64
CD3DP04234 TDGP1-201ENST00000543961 1229 ntBASIC4.81□□□□□ -1.64
CD3DP04234 AC005632.2-201ENST00000564271 828 ntBASIC4.81□□□□□ -1.64
CD3DP04234 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CD3DP04234 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC4.81□□□□□ -1.64
CD3DP04234 AC036176.3-201ENST00000602456 418 ntBASIC4.81□□□□□ -1.64
CD3DP04234 AL390877.1-201ENST00000605704 214 ntBASIC4.81□□□□□ -1.64
CD3DP04234 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CD3DP04234 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD3DP04234 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD3DP04234 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CD3DP04234 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CD3DP04234 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CD3DP04234 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms