Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC7.46□□□□□ -1.22
SOX1O00570 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SOX1O00570 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SOX1O00570 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC7.46□□□□□ -1.22
SOX1O00570 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SOX1O00570 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SOX1O00570 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SOX1O00570 TOPORSLP1-201ENST00000467693 2102 ntBASIC7.46□□□□□ -1.22
SOX1O00570 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SOX1O00570 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SOX1O00570 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SOX1O00570 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SOX1O00570 AC018688.1-201ENST00000636528 1754 ntBASIC7.46□□□□□ -1.22
SOX1O00570 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SOX1O00570 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC7.46□□□□□ -1.22
SOX1O00570 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SOX1O00570 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SOX1O00570 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SOX1O00570 AC104964.2-201ENST00000562242 4641 ntBASIC7.45□□□□□ -1.22
SOX1O00570 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
SOX1O00570 SAMMSON-222ENST00000641901 2727 ntBASIC7.45□□□□□ -1.22
SOX1O00570 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.45□□□□□ -1.22
SOX1O00570 AL356317.1-201ENST00000396110 1436 ntBASIC7.45□□□□□ -1.22
SOX1O00570 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC7.45□□□□□ -1.22
SOX1O00570 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SOX1O00570 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
SOX1O00570 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SOX1O00570 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SOX1O00570 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC7.45□□□□□ -1.22
SOX1O00570 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SOX1O00570 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
SOX1O00570 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SOX1O00570 AC078880.4-201ENST00000617627 1749 ntBASIC7.45□□□□□ -1.22
SOX1O00570 GABRP-203ENST00000518525 3576 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
SOX1O00570 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SOX1O00570 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
SOX1O00570 RPL11P4-201ENST00000332269 436 ntBASIC7.45□□□□□ -1.22
SOX1O00570 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SOX1O00570 MIR575-201ENST00000385013 94 ntBASIC7.45□□□□□ -1.22
SOX1O00570 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.45□□□□□ -1.22
SOX1O00570 AL603650.1-201ENST00000412680 240 ntBASIC7.45□□□□□ -1.22
SOX1O00570 Z75741.2-201ENST00000417272 1167 ntBASIC7.45□□□□□ -1.22
SOX1O00570 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC7.45□□□□□ -1.22
SOX1O00570 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC7.45□□□□□ -1.22
SOX1O00570 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC7.45□□□□□ -1.22
SOX1O00570 AL353754.1-201ENST00000440219 340 ntBASIC7.45□□□□□ -1.22
SOX1O00570 KRTAP8-2P-201ENST00000440620 186 ntBASIC7.45□□□□□ -1.22
SOX1O00570 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC7.45□□□□□ -1.22
SOX1O00570 GAPDHP20-201ENST00000444107 1007 ntBASIC7.45□□□□□ -1.22
SOX1O00570 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC7.45□□□□□ -1.22
SOX1O00570 AC097463.1-201ENST00000447288 481 ntBASIC7.45□□□□□ -1.22
SOX1O00570 RAB28P3-201ENST00000448325 597 ntBASIC7.45□□□□□ -1.22
SOX1O00570 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC7.45□□□□□ -1.22
SOX1O00570 AC007998.1-201ENST00000474156 672 ntBASIC7.45□□□□□ -1.22
SOX1O00570 AC011825.1-201ENST00000484967 388 ntBASIC7.45□□□□□ -1.22
SOX1O00570 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.45□□□□□ -1.22
SOX1O00570 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC7.45□□□□□ -1.22
SOX1O00570 CDC42P4-201ENST00000510507 563 ntBASIC7.45□□□□□ -1.22
SOX1O00570 GCSHP1-201ENST00000512554 484 ntBASIC7.45□□□□□ -1.22
SOX1O00570 ZNF519P4-201ENST00000514008 125 ntBASIC7.45□□□□□ -1.22
SOX1O00570 CR383658.1-201ENST00000514609 734 ntBASIC7.45□□□□□ -1.22
SOX1O00570 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC7.45□□□□□ -1.22
SOX1O00570 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC7.45□□□□□ -1.22
SOX1O00570 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.45□□□□□ -1.22
SOX1O00570 NDUFA5P2-201ENST00000519723 344 ntBASIC7.45□□□□□ -1.22
SOX1O00570 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SOX1O00570 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC7.45□□□□□ -1.22
SOX1O00570 OR4A6P-201ENST00000534364 970 ntBASIC7.45□□□□□ -1.22
SOX1O00570 EEF1B2P4-201ENST00000551398 348 ntBASIC7.45□□□□□ -1.22
SOX1O00570 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC7.45□□□□□ -1.22
SOX1O00570 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC7.45□□□□□ -1.22
SOX1O00570 HNRNPCP1-201ENST00000556181 766 ntBASIC7.45□□□□□ -1.22
SOX1O00570 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC7.45□□□□□ -1.22
SOX1O00570 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.45□□□□□ -1.22
SOX1O00570 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC7.45□□□□□ -1.22
SOX1O00570 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC7.45□□□□□ -1.22
SOX1O00570 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.45□□□□□ -1.22
SOX1O00570 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC7.45□□□□□ -1.22
SOX1O00570 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.45□□□□□ -1.22
SOX1O00570 AL359757.1-201ENST00000623176 255 ntBASIC7.45□□□□□ -1.22
SOX1O00570 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC7.45□□□□□ -1.22
SOX1O00570 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
SOX1O00570 CCT5-215ENST00000625723 135 ntTSL 5 BASIC7.45□□□□□ -1.22
SOX1O00570 WDR75-207ENST00000631047 270 ntTSL 5 BASIC7.45□□□□□ -1.22
SOX1O00570 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
SOX1O00570 GCNT2-216ENST00000495262 2214 ntAPPRIS ALT1 TSL 2 BASIC7.45□□□□□ -1.22
SOX1O00570 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.45□□□□□ -1.22
SOX1O00570 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SOX1O00570 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SOX1O00570 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SOX1O00570 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SOX1O00570 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC7.45□□□□□ -1.22
SOX1O00570 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SOX1O00570 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC7.45□□□□□ -1.22
SOX1O00570 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
SOX1O00570 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC7.45□□□□□ -1.22
SOX1O00570 LINC00294-201ENST00000631190 3306 ntBASIC7.45□□□□□ -1.22
SOX1O00570 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
SOX1O00570 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
SOX1O00570 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms