Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC103855.4-201ENST00000533158 265 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 NUTF2P2-201ENST00000551207 384 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 MIR4642-201ENST00000583943 82 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 AC008770.1-206ENST00000589551 523 ntTSL 3 BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 AL137190.1-201ENST00000603288 282 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 AC107214.2-201ENST00000608204 634 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 AC131902.3-201ENST00000611767 581 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 AL020991.1-201ENST00000612314 373 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 AL139089.1-201ENST00000620372 975 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 AC010338.1-201ENST00000621823 717 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 AC073348.1-201ENST00000623002 331 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 AC022150.4-201ENST00000598322 2848 ntBASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 AL590999.1-201ENST00000607675 3776 ntTSL 2 BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
PCDHB11Q9Y5F2 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 TBX5-AS1-201ENST00000528549 3620 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 HSP90AB7P-201ENST00000450068 2454 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AC011447.7-201ENST00000624228 1590 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AC100810.3-201ENST00000633189 2240 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 RIT2-201ENST00000326695 1092 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 RNU5F-6P-201ENST00000362979 116 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 SNORA30B-201ENST00000365319 129 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 RN7SKP208-201ENST00000365474 361 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 MTCO3P40-201ENST00000392516 676 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AL034403.1-201ENST00000399414 885 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 RNU2-42P-201ENST00000410697 113 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AC074117.1-203ENST00000412749 399 ntTSL 3 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AC093698.1-201ENST00000423843 571 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 TIMM9P3-201ENST00000428659 274 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 RPS4XP4-201ENST00000443195 763 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 GCNT1P5-201ENST00000449274 682 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 RPS29P5-201ENST00000452777 171 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AL033528.1-201ENST00000453780 140 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 ABRACL-202ENST00000461027 456 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AC109454.1-201ENST00000471205 498 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 RN7SL416P-201ENST00000494042 298 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AC019235.1-201ENST00000503847 207 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 PAICSP4-201ENST00000517543 1253 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 MINCR-206ENST00000524335 499 ntTSL 2 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AP002748.2-201ENST00000528671 348 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AC137768.1-201ENST00000549998 553 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 OR4F28P-201ENST00000559128 938 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AL133457.1-201ENST00000564251 987 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 MIR3913-1-201ENST00000577744 102 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 MIR744-201ENST00000578242 98 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 OR4F8P-201ENST00000589943 937 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 RPS11-202ENST00000594493 575 ntTSL 3 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AC008277.2-201ENST00000605196 797 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 CGA-202ENST00000610310 615 ntTSL 3 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 RNVU1-19-201ENST00000613023 167 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AC019278.1-201ENST00000623516 479 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AC120349.2-201ENST00000625002 298 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 PHF2P2-202ENST00000444553 2865 ntBASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC7.69□□□□□ -1.18
PCDHB11Q9Y5F2 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms