Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SIN3AQ96ST3 AC010168.2-201ENST00000562691 5428 ntBASIC8.34□□□□□ -1.07
SIN3AQ96ST3 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SIN3AQ96ST3 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SIN3AQ96ST3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
SIN3AQ96ST3 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
SIN3AQ96ST3 NENFP1-201ENST00000419476 466 ntBASIC8.34□□□□□ -1.07
SIN3AQ96ST3 AC093155.2-201ENST00000420734 937 ntBASIC8.34□□□□□ -1.07
SIN3AQ96ST3 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC8.34□□□□□ -1.07
SIN3AQ96ST3 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC8.34□□□□□ -1.07
SIN3AQ96ST3 RPL23AP19-201ENST00000436229 369 ntBASIC8.34□□□□□ -1.07
SIN3AQ96ST3 SNORA70.20-201ENST00000516848 126 ntBASIC8.34□□□□□ -1.07
SIN3AQ96ST3 IGLV3-24-201ENST00000517477 197 ntBASIC8.34□□□□□ -1.07
SIN3AQ96ST3 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC8.34□□□□□ -1.07
SIN3AQ96ST3 AL121594.2-201ENST00000541658 472 ntBASIC8.34□□□□□ -1.07
SIN3AQ96ST3 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC8.34□□□□□ -1.07
SIN3AQ96ST3 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC8.34□□□□□ -1.07
SIN3AQ96ST3 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC8.34□□□□□ -1.07
SIN3AQ96ST3 AL513327.3-201ENST00000602618 469 ntBASIC8.34□□□□□ -1.07
SIN3AQ96ST3 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC8.34□□□□□ -1.07
SIN3AQ96ST3 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC8.34□□□□□ -1.07
SIN3AQ96ST3 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC8.34□□□□□ -1.07
SIN3AQ96ST3 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SIN3AQ96ST3 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SIN3AQ96ST3 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SIN3AQ96ST3 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC8.34□□□□□ -1.07
SIN3AQ96ST3 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC8.34□□□□□ -1.07
SIN3AQ96ST3 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
SIN3AQ96ST3 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.08
SIN3AQ96ST3 AC138907.8-201ENST00000623981 2256 ntBASIC8.33□□□□□ -1.08
SIN3AQ96ST3 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC8.33□□□□□ -1.08
SIN3AQ96ST3 AC104964.3-201ENST00000606115 2860 ntBASIC8.33□□□□□ -1.08
SIN3AQ96ST3 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SIN3AQ96ST3 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SIN3AQ96ST3 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC8.33□□□□□ -1.08
SIN3AQ96ST3 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SIN3AQ96ST3 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
SIN3AQ96ST3 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC8.33□□□□□ -1.08
SIN3AQ96ST3 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC8.33□□□□□ -1.08
SIN3AQ96ST3 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC8.33□□□□□ -1.08
SIN3AQ96ST3 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC8.33□□□□□ -1.08
SIN3AQ96ST3 RPL36AP39-201ENST00000445859 318 ntBASIC8.33□□□□□ -1.08
SIN3AQ96ST3 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SIN3AQ96ST3 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC8.33□□□□□ -1.08
SIN3AQ96ST3 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC8.33□□□□□ -1.08
SIN3AQ96ST3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC8.33□□□□□ -1.08
SIN3AQ96ST3 AC068870.1-201ENST00000563737 2455 ntBASIC8.33□□□□□ -1.08
SIN3AQ96ST3 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC8.33□□□□□ -1.08
SIN3AQ96ST3 PRELID3BP3-201ENST00000584963 545 ntBASIC8.33□□□□□ -1.08
SIN3AQ96ST3 AP001962.1-201ENST00000624114 559 ntBASIC8.33□□□□□ -1.08
SIN3AQ96ST3 UGP2-232ENST00000640075 567 ntTSL 5 BASIC8.33□□□□□ -1.08
SIN3AQ96ST3 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SIN3AQ96ST3 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SIN3AQ96ST3 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC8.33□□□□□ -1.08
SIN3AQ96ST3 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SIN3AQ96ST3 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC8.33□□□□□ -1.08
SIN3AQ96ST3 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SIN3AQ96ST3 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SIN3AQ96ST3 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SIN3AQ96ST3 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SIN3AQ96ST3 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 AC117409.1-201ENST00000470499 1310 ntBASIC8.32□□□□□ -1.08
SIN3AQ96ST3 KYNUP3-201ENST00000574386 1341 ntBASIC8.32□□□□□ -1.08
SIN3AQ96ST3 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 AC015689.2-201ENST00000528172 1738 ntBASIC8.32□□□□□ -1.08
SIN3AQ96ST3 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 OR13C1P-202ENST00000641378 2919 ntBASIC8.32□□□□□ -1.08
SIN3AQ96ST3 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 MIR375-201ENST00000362103 64 ntBASIC8.32□□□□□ -1.08
SIN3AQ96ST3 U3.10-201ENST00000364459 214 ntBASIC8.32□□□□□ -1.08
SIN3AQ96ST3 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 CYP2AC1P-201ENST00000407830 1173 ntBASIC8.32□□□□□ -1.08
SIN3AQ96ST3 RPL12P16-201ENST00000431098 498 ntBASIC8.32□□□□□ -1.08
SIN3AQ96ST3 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 AP000281.1-201ENST00000444036 316 ntBASIC8.32□□□□□ -1.08
SIN3AQ96ST3 OR7E116P-201ENST00000448529 957 ntBASIC8.32□□□□□ -1.08
SIN3AQ96ST3 AC090142.2-201ENST00000483263 416 ntBASIC8.32□□□□□ -1.08
SIN3AQ96ST3 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 IGHVIII-76-1-201ENST00000523776 286 ntBASIC8.32□□□□□ -1.08
SIN3AQ96ST3 AC027544.3-201ENST00000535082 757 ntBASIC8.32□□□□□ -1.08
SIN3AQ96ST3 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 MIR193BHG-214ENST00000641765 509 ntBASIC8.32□□□□□ -1.08
SIN3AQ96ST3 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC8.32□□□□□ -1.08
SIN3AQ96ST3 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms