Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC236972.2-201ENST00000434979 310 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 LINC00350-201ENST00000438640 422 ntTSL 5 BASIC8.64□□□□□ -1.03
LRCH3Q96II8 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC8.64□□□□□ -1.03
LRCH3Q96II8 AC005840.2-201ENST00000447193 355 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 AC092634.4-203ENST00000451395 448 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC8.64□□□□□ -1.03
LRCH3Q96II8 AL162395.1-201ENST00000457882 422 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 MTND5P22-201ENST00000458380 195 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 AC096741.1-201ENST00000472250 846 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC8.64□□□□□ -1.03
LRCH3Q96II8 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC8.64□□□□□ -1.03
LRCH3Q96II8 RNU6-1281P-201ENST00000516223 105 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 RAD21-204ENST00000518055 896 ntTSL 2 BASIC8.64□□□□□ -1.03
LRCH3Q96II8 OPRK1-204ENST00000524278 1195 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
LRCH3Q96II8 KCTD9P4-201ENST00000526766 1166 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 COX6CP5-201ENST00000527162 228 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 OR6C73P-201ENST00000546432 358 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC8.64□□□□□ -1.03
LRCH3Q96II8 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC8.64□□□□□ -1.03
LRCH3Q96II8 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC8.64□□□□□ -1.03
LRCH3Q96II8 FDPSP3-201ENST00000556903 1013 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC8.64□□□□□ -1.03
LRCH3Q96II8 RN7SL66P-201ENST00000582099 264 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC8.64□□□□□ -1.03
LRCH3Q96II8 SNRPGP17-201ENST00000603780 214 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 SUGT1P3-202ENST00000604259 383 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 ACTR3BP1-201ENST00000605584 1247 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 AL161931.1-201ENST00000612768 246 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 AC008250.2-201ENST00000615261 205 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 RMST_7.1-201ENST00000621935 268 ntBASIC8.64□□□□□ -1.03
LRCH3Q96II8 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC8.64□□□□□ -1.03
LRCH3Q96II8 LDAH-201ENST00000237822 2907 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LRCH3Q96II8 ANAPC5-208ENST00000535482 2077 ntTSL 2 BASIC8.64□□□□□ -1.03
LRCH3Q96II8 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LRCH3Q96II8 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
LRCH3Q96II8 KLKB1-201ENST00000264690 2363 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LRCH3Q96II8 LINC00210-201ENST00000431637 1584 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
LRCH3Q96II8 ZNF781-201ENST00000358582 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LRCH3Q96II8 CASP7-207ENST00000452490 2271 ntTSL 2 BASIC8.64□□□□□ -1.03
LRCH3Q96II8 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LRCH3Q96II8 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
LRCH3Q96II8 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC8.64□□□□□ -1.03
LRCH3Q96II8 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
LRCH3Q96II8 WARS-204ENST00000392882 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LRCH3Q96II8 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
LRCH3Q96II8 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC8.64□□□□□ -1.03
LRCH3Q96II8 NVL-212ENST00000469968 2510 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
LRCH3Q96II8 TMEM108-203ENST00000508711 2470 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
LRCH3Q96II8 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
LRCH3Q96II8 DDX3Y-202ENST00000360160 2709 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
LRCH3Q96II8 HSPD1P7-201ENST00000447985 1686 ntBASIC8.63□□□□□ -1.03
LRCH3Q96II8 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
LRCH3Q96II8 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
LRCH3Q96II8 NELL2-202ENST00000395487 3203 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
LRCH3Q96II8 DEFB105A-201ENST00000334773 330 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
LRCH3Q96II8 RNA5SP27-201ENST00000363839 119 ntBASIC8.63□□□□□ -1.03
LRCH3Q96II8 RNU6-505P-201ENST00000384427 107 ntBASIC8.63□□□□□ -1.03
LRCH3Q96II8 ARSFP1-201ENST00000398758 477 ntBASIC8.63□□□□□ -1.03
LRCH3Q96II8 CCNYL3-201ENST00000407030 998 ntBASIC8.63□□□□□ -1.03
LRCH3Q96II8 RNU2-62P-201ENST00000410868 191 ntBASIC8.63□□□□□ -1.03
LRCH3Q96II8 SNRPEP10-201ENST00000420249 274 ntBASIC8.63□□□□□ -1.03
LRCH3Q96II8 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC8.63□□□□□ -1.03
LRCH3Q96II8 OFD1P12Y-201ENST00000427963 1207 ntBASIC8.63□□□□□ -1.03
LRCH3Q96II8 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC8.63□□□□□ -1.03
LRCH3Q96II8 AC012506.4-202ENST00000430051 572 ntTSL 5 BASIC8.63□□□□□ -1.03
LRCH3Q96II8 FTO-202ENST00000431610 707 ntTSL 3 BASIC8.63□□□□□ -1.03
LRCH3Q96II8 AC231532.1-201ENST00000438584 312 ntBASIC8.63□□□□□ -1.03
LRCH3Q96II8 ARL2BPP10-201ENST00000446487 531 ntBASIC8.63□□□□□ -1.03
LRCH3Q96II8 RN7SL790P-201ENST00000474043 298 ntBASIC8.63□□□□□ -1.03
LRCH3Q96II8 AC090013.1-201ENST00000485147 480 ntBASIC8.63□□□□□ -1.03
LRCH3Q96II8 AC114981.1-201ENST00000503897 678 ntBASIC8.63□□□□□ -1.03
LRCH3Q96II8 AC098799.3-201ENST00000506095 438 ntBASIC8.63□□□□□ -1.03
LRCH3Q96II8 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC8.63□□□□□ -1.03
LRCH3Q96II8 AC026801.2-201ENST00000515352 425 ntBASIC8.63□□□□□ -1.03
LRCH3Q96II8 IGLV1-41-201ENST00000519790 406 ntBASIC8.63□□□□□ -1.03
LRCH3Q96II8 AC239860.2-201ENST00000525886 270 ntBASIC8.63□□□□□ -1.03
LRCH3Q96II8 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC8.63□□□□□ -1.03
LRCH3Q96II8 AC011474.3-201ENST00000587520 250 ntTSL 5 BASIC8.63□□□□□ -1.03
LRCH3Q96II8 AC113139.1-201ENST00000605049 239 ntBASIC8.63□□□□□ -1.03
LRCH3Q96II8 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC8.63□□□□□ -1.03
LRCH3Q96II8 HMGB1P24-202ENST00000615653 685 ntBASIC8.63□□□□□ -1.03
LRCH3Q96II8 AC090527.3-201ENST00000619041 548 ntBASIC8.63□□□□□ -1.03
LRCH3Q96II8 CRYM-AS1-204ENST00000637983 556 ntBASIC8.63□□□□□ -1.03
LRCH3Q96II8 AL137782.1-201ENST00000563635 4128 ntTSL 5 BASIC8.63□□□□□ -1.03
LRCH3Q96II8 MTHFD1-201ENST00000216605 3136 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
LRCH3Q96II8 SOSTDC1-201ENST00000307068 1869 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
LRCH3Q96II8 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
LRCH3Q96II8 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
LRCH3Q96II8 AC020658.3-201ENST00000568093 4028 ntBASIC8.63□□□□□ -1.03
LRCH3Q96II8 PSG3-204ENST00000595140 1724 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
LRCH3Q96II8 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
LRCH3Q96II8 LACTB2-AS1-201ENST00000499227 3716 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
LRCH3Q96II8 EIF4E2-202ENST00000409098 3448 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
LRCH3Q96II8 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
LRCH3Q96II8 PTAFR-202ENST00000373857 4491 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LRCH3Q96II8 AL137145.2-201ENST00000399868 3086 ntTSL 2 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
LRCH3Q96II8 LINC00547-201ENST00000612438 3314 ntTSL 2 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC8.62□□□□□ -1.03
LRCH3Q96II8 PTPDC1-201ENST00000288976 4398 ntAPPRIS P4 TSL 1 (best) BASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms