Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 ARL5AP3-201ENST00000439327 386 ntBASIC6.24□□□□□ -1.41
HMGB4Q8WW32 AC005077.1-201ENST00000449226 375 ntBASIC6.24□□□□□ -1.41
HMGB4Q8WW32 VPS25P1-201ENST00000455691 508 ntBASIC6.24□□□□□ -1.41
HMGB4Q8WW32 RANP2-201ENST00000456833 229 ntBASIC6.24□□□□□ -1.41
HMGB4Q8WW32 AC011476.1-201ENST00000466725 307 ntBASIC6.24□□□□□ -1.41
HMGB4Q8WW32 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 AC092865.1-201ENST00000544395 1023 ntBASIC6.24□□□□□ -1.41
HMGB4Q8WW32 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 MIR6768-201ENST00000610734 72 ntBASIC6.24□□□□□ -1.41
HMGB4Q8WW32 AC126175.1-201ENST00000617041 758 ntBASIC6.24□□□□□ -1.41
HMGB4Q8WW32 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 AC097372.4-201ENST00000625025 466 ntBASIC6.24□□□□□ -1.41
HMGB4Q8WW32 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.24□□□□□ -1.41
HMGB4Q8WW32 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
HMGB4Q8WW32 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 AC005332.9-201ENST00000620266 2921 ntBASIC6.23□□□□□ -1.41
HMGB4Q8WW32 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 Z83820.1-201ENST00000456978 1499 ntBASIC6.23□□□□□ -1.41
HMGB4Q8WW32 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 AC007068.1-201ENST00000396690 844 ntBASIC6.23□□□□□ -1.41
HMGB4Q8WW32 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 U3.43-201ENST00000410734 213 ntBASIC6.23□□□□□ -1.41
HMGB4Q8WW32 SEPT7P8-201ENST00000413308 775 ntBASIC6.23□□□□□ -1.41
HMGB4Q8WW32 AL353626.3-201ENST00000413399 657 ntBASIC6.23□□□□□ -1.41
HMGB4Q8WW32 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 AL713922.1-201ENST00000416477 747 ntBASIC6.23□□□□□ -1.41
HMGB4Q8WW32 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 AL355355.1-201ENST00000442900 793 ntBASIC6.23□□□□□ -1.41
HMGB4Q8WW32 RPL36AP39-201ENST00000445859 318 ntBASIC6.23□□□□□ -1.41
HMGB4Q8WW32 FTLP8-201ENST00000446770 267 ntBASIC6.23□□□□□ -1.41
HMGB4Q8WW32 VN1R38P-201ENST00000450265 887 ntBASIC6.23□□□□□ -1.41
HMGB4Q8WW32 MTND2P30-201ENST00000456663 382 ntBASIC6.23□□□□□ -1.41
HMGB4Q8WW32 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 UBFD1P1-201ENST00000473259 814 ntBASIC6.23□□□□□ -1.41
HMGB4Q8WW32 AC105918.1-201ENST00000474399 838 ntBASIC6.23□□□□□ -1.41
HMGB4Q8WW32 RN7SL193P-201ENST00000491708 276 ntBASIC6.23□□□□□ -1.41
HMGB4Q8WW32 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 AP005119.1-201ENST00000580956 292 ntBASIC6.23□□□□□ -1.41
HMGB4Q8WW32 AC015818.6-201ENST00000584274 634 ntBASIC6.23□□□□□ -1.41
HMGB4Q8WW32 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.23□□□□□ -1.41
HMGB4Q8WW32 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.23□□□□□ -1.41
HMGB4Q8WW32 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms