Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC025283.1-201ENST00000572039 734 ntBASIC6.51□□□□□ -1.37
CCDC112Q8NEF3 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC112Q8NEF3 CXADRP3-202ENST00000617265 1100 ntBASIC6.51□□□□□ -1.37
CCDC112Q8NEF3 MIR6806-201ENST00000622141 64 ntBASIC6.51□□□□□ -1.37
CCDC112Q8NEF3 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC112Q8NEF3 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC112Q8NEF3 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC112Q8NEF3 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC112Q8NEF3 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC112Q8NEF3 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CCDC112Q8NEF3 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC112Q8NEF3 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC112Q8NEF3 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC112Q8NEF3 AC137056.2-201ENST00000624055 1958 ntBASIC6.51□□□□□ -1.37
CCDC112Q8NEF3 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC112Q8NEF3 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC112Q8NEF3 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC112Q8NEF3 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC112Q8NEF3 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 DHFRP2-201ENST00000414224 547 ntBASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 AL138899.2-201ENST00000439139 499 ntBASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 RN7SL413P-201ENST00000482700 297 ntBASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 RN7SKP64-201ENST00000517206 328 ntBASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 AC138832.1-201ENST00000522871 556 ntBASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 AC124891.1-201ENST00000536322 519 ntBASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 TDGP1-201ENST00000543961 1229 ntBASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
CCDC112Q8NEF3 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 OR10R3P-201ENST00000361688 942 ntBASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 RNA5SP211-201ENST00000365516 117 ntBASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 AL139158.1-201ENST00000424719 340 ntBASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 HMGN2P27-201ENST00000427352 270 ntBASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 RPSAP32-201ENST00000432681 526 ntBASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 AC096775.1-201ENST00000437724 448 ntBASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 HIGD1AP16-201ENST00000450986 258 ntBASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 AC026898.1-201ENST00000586404 571 ntBASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 AC011891.2-201ENST00000604949 397 ntBASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 AL591926.1-201ENST00000620542 217 ntBASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 AC089999.3-201ENST00000622440 577 ntBASIC6.49□□□□□ -1.37
CCDC112Q8NEF3 CASC19-274ENST00000642018 970 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms