Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
RNF43Q68DV7 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RNF43Q68DV7 NBEAP1-201ENST00000554452 979 ntBASIC7.42□□□□□ -1.22
RNF43Q68DV7 AL031846.1-201ENST00000560933 314 ntBASIC7.42□□□□□ -1.22
RNF43Q68DV7 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF43Q68DV7 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF43Q68DV7 AC124283.4-201ENST00000581815 456 ntBASIC7.42□□□□□ -1.22
RNF43Q68DV7 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF43Q68DV7 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC7.42□□□□□ -1.22
RNF43Q68DV7 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.42□□□□□ -1.22
RNF43Q68DV7 AC009955.2-201ENST00000597288 542 ntBASIC7.42□□□□□ -1.22
RNF43Q68DV7 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF43Q68DV7 AC023513.1-201ENST00000604396 691 ntBASIC7.42□□□□□ -1.22
RNF43Q68DV7 AC122710.3-201ENST00000606566 541 ntBASIC7.42□□□□□ -1.22
RNF43Q68DV7 AC126118.1-201ENST00000607744 628 ntBASIC7.42□□□□□ -1.22
RNF43Q68DV7 AC092653.1-201ENST00000608509 531 ntBASIC7.42□□□□□ -1.22
RNF43Q68DV7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF43Q68DV7 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.42□□□□□ -1.22
RNF43Q68DV7 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.42□□□□□ -1.22
RNF43Q68DV7 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
RNF43Q68DV7 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RNF43Q68DV7 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
RNF43Q68DV7 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RNF43Q68DV7 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RNF43Q68DV7 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RNF43Q68DV7 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
RNF43Q68DV7 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RNF43Q68DV7 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.42□□□□□ -1.22
RNF43Q68DV7 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
RNF43Q68DV7 RNF19BPY-201ENST00000458209 1550 ntBASIC7.42□□□□□ -1.22
RNF43Q68DV7 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RNF43Q68DV7 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.41□□□□□ -1.22
RNF43Q68DV7 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
RNF43Q68DV7 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.41□□□□□ -1.22
RNF43Q68DV7 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC7.41□□□□□ -1.22
RNF43Q68DV7 AC004023.1-201ENST00000561473 1744 ntBASIC7.41□□□□□ -1.22
RNF43Q68DV7 AC009220.2-201ENST00000489759 1751 ntBASIC7.41□□□□□ -1.22
RNF43Q68DV7 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
RNF43Q68DV7 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF43Q68DV7 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
RNF43Q68DV7 Y_RNA.11-201ENST00000362375 109 ntBASIC7.41□□□□□ -1.22
RNF43Q68DV7 RN7SKP107-201ENST00000364157 290 ntBASIC7.41□□□□□ -1.22
RNF43Q68DV7 AC245036.1-201ENST00000391727 309 ntBASIC7.41□□□□□ -1.22
RNF43Q68DV7 FAUP2-201ENST00000394301 401 ntBASIC7.41□□□□□ -1.22
RNF43Q68DV7 EEF1GP6-201ENST00000402309 905 ntBASIC7.41□□□□□ -1.22
RNF43Q68DV7 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC7.41□□□□□ -1.22
RNF43Q68DV7 AL136310.1-201ENST00000404926 654 ntBASIC7.41□□□□□ -1.22
RNF43Q68DV7 LSM5-206ENST00000409987 504 ntTSL 5 BASIC7.41□□□□□ -1.22
RNF43Q68DV7 RPL7P30-201ENST00000420888 709 ntBASIC7.41□□□□□ -1.22
RNF43Q68DV7 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC7.41□□□□□ -1.22
RNF43Q68DV7 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RNF43Q68DV7 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.41□□□□□ -1.22
RNF43Q68DV7 RPSAP7-201ENST00000456871 885 ntBASIC7.41□□□□□ -1.22
RNF43Q68DV7 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF43Q68DV7 AC026336.1-201ENST00000466577 351 ntBASIC7.41□□□□□ -1.22
RNF43Q68DV7 AC091982.1-202ENST00000473923 343 ntBASIC7.41□□□□□ -1.22
RNF43Q68DV7 CBX1P5-201ENST00000475330 559 ntBASIC7.41□□□□□ -1.22
RNF43Q68DV7 MYL6P4-201ENST00000477911 453 ntBASIC7.41□□□□□ -1.22
RNF43Q68DV7 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC7.41□□□□□ -1.22
RNF43Q68DV7 RPL9P33-201ENST00000484311 566 ntBASIC7.41□□□□□ -1.22
RNF43Q68DV7 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC7.41□□□□□ -1.22
RNF43Q68DV7 NREP-223ENST00000515855 801 ntTSL 4 BASIC7.41□□□□□ -1.22
RNF43Q68DV7 RNU6-528P-201ENST00000516926 100 ntBASIC7.41□□□□□ -1.22
RNF43Q68DV7 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC7.41□□□□□ -1.22
RNF43Q68DV7 AC092851.1-201ENST00000535964 478 ntBASIC7.41□□□□□ -1.22
RNF43Q68DV7 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC7.41□□□□□ -1.22
RNF43Q68DV7 AC107958.1-201ENST00000556576 290 ntBASIC7.41□□□□□ -1.22
RNF43Q68DV7 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC7.41□□□□□ -1.22
RNF43Q68DV7 AC244034.2-201ENST00000562504 509 ntBASIC7.41□□□□□ -1.22
RNF43Q68DV7 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC7.41□□□□□ -1.22
RNF43Q68DV7 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC7.41□□□□□ -1.22
RNF43Q68DV7 AC015819.1-201ENST00000613588 663 ntBASIC7.41□□□□□ -1.22
RNF43Q68DV7 SEPT14P19-203ENST00000633205 211 ntBASIC7.41□□□□□ -1.22
RNF43Q68DV7 CASC19-232ENST00000641480 1244 ntBASIC7.41□□□□□ -1.22
RNF43Q68DV7 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.41□□□□□ -1.22
RNF43Q68DV7 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.41□□□□□ -1.22
RNF43Q68DV7 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RNF43Q68DV7 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF43Q68DV7 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF43Q68DV7 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
RNF43Q68DV7 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
RNF43Q68DV7 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF43Q68DV7 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF43Q68DV7 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF43Q68DV7 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RNF43Q68DV7 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RNF43Q68DV7 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.41□□□□□ -1.22
RNF43Q68DV7 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
RNF43Q68DV7 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RNF43Q68DV7 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
RNF43Q68DV7 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 AL359263.1-201ENST00000441188 2796 ntBASIC7.4□□□□□ -1.22
RNF43Q68DV7 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
RNF43Q68DV7 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RNF43Q68DV7 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
RNF43Q68DV7 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms