Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.71□□□□□ -1.49
RIF1Q5UIP0 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.71□□□□□ -1.49
RIF1Q5UIP0 RBM22P1-201ENST00000578589 1214 ntBASIC5.71□□□□□ -1.49
RIF1Q5UIP0 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
RIF1Q5UIP0 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RIF1Q5UIP0 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RIF1Q5UIP0 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.5
RIF1Q5UIP0 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RIF1Q5UIP0 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RIF1Q5UIP0 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RIF1Q5UIP0 HSPA8P14-201ENST00000552265 1805 ntBASIC5.71□□□□□ -1.5
RIF1Q5UIP0 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RIF1Q5UIP0 RNA5SP339-201ENST00000390987 122 ntBASIC5.71□□□□□ -1.5
RIF1Q5UIP0 CHMP1B2P-201ENST00000399581 597 ntBASIC5.71□□□□□ -1.5
RIF1Q5UIP0 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.71□□□□□ -1.5
RIF1Q5UIP0 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.71□□□□□ -1.5
RIF1Q5UIP0 AC016027.4-201ENST00000450866 277 ntBASIC5.71□□□□□ -1.5
RIF1Q5UIP0 RPS3AP53-201ENST00000454716 778 ntBASIC5.71□□□□□ -1.5
RIF1Q5UIP0 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.71□□□□□ -1.5
RIF1Q5UIP0 AC026979.1-201ENST00000492525 396 ntBASIC5.71□□□□□ -1.5
RIF1Q5UIP0 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RIF1Q5UIP0 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.71□□□□□ -1.5
RIF1Q5UIP0 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.71□□□□□ -1.5
RIF1Q5UIP0 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.71□□□□□ -1.5
RIF1Q5UIP0 AL020997.2-201ENST00000602607 184 ntBASIC5.71□□□□□ -1.5
RIF1Q5UIP0 AC087283.1-201ENST00000604029 1074 ntBASIC5.71□□□□□ -1.5
RIF1Q5UIP0 AC132068.1-201ENST00000623805 459 ntBASIC5.71□□□□□ -1.5
RIF1Q5UIP0 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RIF1Q5UIP0 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RIF1Q5UIP0 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RIF1Q5UIP0 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RIF1Q5UIP0 AP001527.1-201ENST00000566440 1957 ntBASIC5.71□□□□□ -1.5
RIF1Q5UIP0 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RIF1Q5UIP0 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RIF1Q5UIP0 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 AP002370.1-201ENST00000528055 1602 ntBASIC5.7□□□□□ -1.5
RIF1Q5UIP0 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 CDK7P1-201ENST00000434574 693 ntBASIC5.7□□□□□ -1.5
RIF1Q5UIP0 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 AC007485.2-201ENST00000623493 1667 ntBASIC5.7□□□□□ -1.5
RIF1Q5UIP0 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 MROH3P-201ENST00000435735 2676 ntBASIC5.7□□□□□ -1.5
RIF1Q5UIP0 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 RNA5SP478-201ENST00000364657 115 ntBASIC5.7□□□□□ -1.5
RIF1Q5UIP0 DUTP5-201ENST00000406790 469 ntBASIC5.7□□□□□ -1.5
RIF1Q5UIP0 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 AC016712.1-201ENST00000431088 378 ntBASIC5.7□□□□□ -1.5
RIF1Q5UIP0 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 AC115837.1-201ENST00000517662 1001 ntBASIC5.7□□□□□ -1.5
RIF1Q5UIP0 IGLV3-6-201ENST00000523937 250 ntBASIC5.7□□□□□ -1.5
RIF1Q5UIP0 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 AL359704.2-201ENST00000604335 521 ntBASIC5.7□□□□□ -1.5
RIF1Q5UIP0 PPATP2-201ENST00000605635 508 ntBASIC5.7□□□□□ -1.5
RIF1Q5UIP0 AC009948.5-201ENST00000624360 4406 ntBASIC5.7□□□□□ -1.5
RIF1Q5UIP0 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RIF1Q5UIP0 SPATA31B1P-201ENST00000434692 4016 ntBASIC5.7□□□□□ -1.5
RIF1Q5UIP0 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RIF1Q5UIP0 MIR541-201ENST00000401360 84 ntBASIC5.69□□□□□ -1.5
RIF1Q5UIP0 NPM1P40-201ENST00000412758 733 ntBASIC5.69□□□□□ -1.5
RIF1Q5UIP0 COX6B1P1-201ENST00000415962 213 ntBASIC5.69□□□□□ -1.5
RIF1Q5UIP0 AP000547.1-201ENST00000454360 617 ntBASIC5.69□□□□□ -1.5
RIF1Q5UIP0 RN7SL354P-201ENST00000469282 294 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms