Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH1Q08174 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH1Q08174 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH1Q08174 AP005901.5-201ENST00000545779 1796 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC7.12□□□□□ -1.27
PCDH1Q08174 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH1Q08174 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDH1Q08174 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH1Q08174 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDH1Q08174 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH1Q08174 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH1Q08174 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PCDH1Q08174 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
PCDH1Q08174 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDH1Q08174 Z83820.1-201ENST00000456978 1499 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 DDX50P1-201ENST00000438163 2400 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PCDH1Q08174 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDH1Q08174 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
PCDH1Q08174 AC061975.7-201ENST00000592016 2692 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
PCDH1Q08174 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PCDH1Q08174 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
PCDH1Q08174 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
PCDH1Q08174 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PCDH1Q08174 SNORA75-201ENST00000384158 137 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 RNU6-253P-201ENST00000384730 105 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 MIR142-201ENST00000384835 87 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 AC093719.1-202ENST00000392735 373 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 AL512430.2-201ENST00000406786 339 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 SNORA3.1-201ENST00000408166 111 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDH1Q08174 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PCDH1Q08174 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDH1Q08174 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDH1Q08174 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDH1Q08174 AC104651.1-201ENST00000427559 735 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 AC010975.2-201ENST00000427781 588 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 AC009299.1-201ENST00000429684 717 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDH1Q08174 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDH1Q08174 DEFA9P-201ENST00000433042 285 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 HBBP1-201ENST00000433329 439 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 ST13P20-201ENST00000447996 1065 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDH1Q08174 TCEAL4P1-201ENST00000453620 588 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDH1Q08174 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PCDH1Q08174 AC022730.2-201ENST00000465359 452 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDH1Q08174 H3F3AP5-201ENST00000475267 429 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 AC116337.2-201ENST00000477662 156 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 AC066616.1-201ENST00000486795 413 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 PDCL3P4-201ENST00000489621 720 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 AC097263.1-201ENST00000496795 606 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDH1Q08174 AC055733.3-201ENST00000505214 523 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDH1Q08174 RNU6-528P-201ENST00000516926 100 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 RPL10P18-201ENST00000519384 309 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 OR4A21P-201ENST00000532759 944 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.11□□□□□ -1.27
PCDH1Q08174 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDH1Q08174 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDH1Q08174 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDH1Q08174 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDH1Q08174 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC7.11□□□□□ -1.27
PCDH1Q08174 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDH1Q08174 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC7.11□□□□□ -1.27
PCDH1Q08174 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDH1Q08174 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC7.11□□□□□ -1.27
PCDH1Q08174 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDH1Q08174 OR7E94P-202ENST00000601375 790 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC7.11□□□□□ -1.27
PCDH1Q08174 AC022001.1-201ENST00000605193 268 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 AC092354.1-201ENST00000606057 376 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 AC091965.4-201ENST00000607691 587 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDH1Q08174 AC099676.1-201ENST00000608886 657 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDH1Q08174 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
PCDH1Q08174 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDH1Q08174 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
PCDH1Q08174 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDH1Q08174 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
PCDH1Q08174 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDH1Q08174 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.11□□□□□ -1.27
PCDH1Q08174 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.11□□□□□ -1.27
PCDH1Q08174 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDH1Q08174 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDH1Q08174 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDH1Q08174 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PCDH1Q08174 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDH1Q08174 AC138393.1-206ENST00000540997 1886 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 AL590065.1-201ENST00000603371 4774 ntBASIC7.11□□□□□ -1.27
PCDH1Q08174 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
PCDH1Q08174 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.1□□□□□ -1.27
PCDH1Q08174 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PCDH1Q08174 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms