Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RNA5SP334-201ENST00000364825 118 ntBASIC6.8□□□□□ -1.32
CCNA1P78396 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCNA1P78396 NPM1P38-201ENST00000403835 865 ntBASIC6.8□□□□□ -1.32
CCNA1P78396 AL662874.1-201ENST00000426065 230 ntBASIC6.8□□□□□ -1.32
CCNA1P78396 AC099677.3-201ENST00000427081 395 ntBASIC6.8□□□□□ -1.32
CCNA1P78396 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.8□□□□□ -1.32
CCNA1P78396 AL022331.1-201ENST00000429025 477 ntBASIC6.8□□□□□ -1.32
CCNA1P78396 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCNA1P78396 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.8□□□□□ -1.32
CCNA1P78396 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.8□□□□□ -1.32
CCNA1P78396 AL133445.1-201ENST00000467051 452 ntBASIC6.8□□□□□ -1.32
CCNA1P78396 OR7E157P-201ENST00000494376 911 ntBASIC6.8□□□□□ -1.32
CCNA1P78396 RNA5SP34-201ENST00000516887 130 ntBASIC6.8□□□□□ -1.32
CCNA1P78396 SNORA43.3-201ENST00000517240 103 ntBASIC6.8□□□□□ -1.32
CCNA1P78396 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.8□□□□□ -1.32
CCNA1P78396 AL049872.1-201ENST00000556323 322 ntBASIC6.8□□□□□ -1.32
CCNA1P78396 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.8□□□□□ -1.32
CCNA1P78396 AC145423.1-201ENST00000605712 336 ntBASIC6.8□□□□□ -1.32
CCNA1P78396 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.8□□□□□ -1.32
CCNA1P78396 AL445670.1-201ENST00000618889 801 ntBASIC6.8□□□□□ -1.32
CCNA1P78396 MIR6719-201ENST00000622428 87 ntBASIC6.8□□□□□ -1.32
CCNA1P78396 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCNA1P78396 MAPK10-261ENST00000641050 3109 ntBASIC6.8□□□□□ -1.32
CCNA1P78396 AC119674.1-213ENST00000641177 1386 ntBASIC6.8□□□□□ -1.32
CCNA1P78396 AL137058.3-201ENST00000624531 3099 ntBASIC6.8□□□□□ -1.32
CCNA1P78396 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCNA1P78396 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
CCNA1P78396 AL078595.2-201ENST00000605309 1780 ntBASIC6.8□□□□□ -1.32
CCNA1P78396 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCNA1P78396 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCNA1P78396 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCNA1P78396 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
CCNA1P78396 AC092692.1-201ENST00000623625 2595 ntBASIC6.79□□□□□ -1.32
CCNA1P78396 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.79□□□□□ -1.32
CCNA1P78396 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCNA1P78396 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCNA1P78396 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCNA1P78396 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCNA1P78396 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
CCNA1P78396 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCNA1P78396 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCNA1P78396 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCNA1P78396 AL391422.1-201ENST00000402155 436 ntBASIC6.79□□□□□ -1.32
CCNA1P78396 MRPL53P1-201ENST00000414323 319 ntBASIC6.79□□□□□ -1.32
CCNA1P78396 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.79□□□□□ -1.32
CCNA1P78396 RPS4XP5-201ENST00000419038 768 ntBASIC6.79□□□□□ -1.32
CCNA1P78396 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCNA1P78396 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.79□□□□□ -1.32
CCNA1P78396 TNPO1P1-201ENST00000423641 1138 ntBASIC6.79□□□□□ -1.32
CCNA1P78396 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.79□□□□□ -1.32
CCNA1P78396 CLUHP1-201ENST00000435012 1190 ntBASIC6.79□□□□□ -1.32
CCNA1P78396 EEF1B2P6-201ENST00000445713 673 ntBASIC6.79□□□□□ -1.32
CCNA1P78396 AL022237.1-201ENST00000446663 358 ntBASIC6.79□□□□□ -1.32
CCNA1P78396 RPS27AP3-201ENST00000453803 454 ntBASIC6.79□□□□□ -1.32
CCNA1P78396 RPS17P15-201ENST00000475609 349 ntBASIC6.79□□□□□ -1.32
CCNA1P78396 RPL23AP40-201ENST00000487630 390 ntBASIC6.79□□□□□ -1.32
CCNA1P78396 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.79□□□□□ -1.32
CCNA1P78396 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.79□□□□□ -1.32
CCNA1P78396 RNU6-615P-201ENST00000516065 106 ntBASIC6.79□□□□□ -1.32
CCNA1P78396 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.79□□□□□ -1.32
CCNA1P78396 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.79□□□□□ -1.32
CCNA1P78396 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.79□□□□□ -1.32
CCNA1P78396 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.79□□□□□ -1.32
CCNA1P78396 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.79□□□□□ -1.32
CCNA1P78396 AC008536.1-201ENST00000602872 669 ntBASIC6.79□□□□□ -1.32
CCNA1P78396 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.79□□□□□ -1.32
CCNA1P78396 AC024589.2-201ENST00000605642 1294 ntBASIC6.79□□□□□ -1.32
CCNA1P78396 TCL6_3.1-201ENST00000619064 137 ntBASIC6.79□□□□□ -1.32
CCNA1P78396 CU639417.4-201ENST00000623928 207 ntBASIC6.79□□□□□ -1.32
CCNA1P78396 AC007683.2-201ENST00000624681 714 ntBASIC6.79□□□□□ -1.32
CCNA1P78396 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.79□□□□□ -1.32
CCNA1P78396 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.79□□□□□ -1.32
CCNA1P78396 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCNA1P78396 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
CCNA1P78396 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCNA1P78396 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
CCNA1P78396 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.79□□□□□ -1.32
CCNA1P78396 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.79□□□□□ -1.32
CCNA1P78396 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCNA1P78396 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCNA1P78396 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCNA1P78396 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCNA1P78396 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCNA1P78396 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCNA1P78396 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCNA1P78396 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.79□□□□□ -1.32
CCNA1P78396 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.79□□□□□ -1.32
CCNA1P78396 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCNA1P78396 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCNA1P78396 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.78□□□□□ -1.32
CCNA1P78396 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
CCNA1P78396 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCNA1P78396 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCNA1P78396 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCNA1P78396 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CCNA1P78396 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCNA1P78396 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCNA1P78396 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CCNA1P78396 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.78□□□□□ -1.32
CCNA1P78396 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms