Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN6P56747 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN6P56747 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN6P56747 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CLDN6P56747 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN6P56747 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
CLDN6P56747 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN6P56747 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN6P56747 AL117378.2-201ENST00000622916 1337 ntBASIC5.77□□□□□ -1.49
CLDN6P56747 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN6P56747 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN6P56747 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.77□□□□□ -1.49
CLDN6P56747 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN6P56747 SELENOWP1-201ENST00000322792 252 ntBASIC5.77□□□□□ -1.49
CLDN6P56747 OR7E101P-201ENST00000400428 513 ntBASIC5.77□□□□□ -1.49
CLDN6P56747 MRPL53P1-201ENST00000414323 319 ntBASIC5.77□□□□□ -1.49
CLDN6P56747 MTND4LP17-201ENST00000414607 293 ntBASIC5.77□□□□□ -1.49
CLDN6P56747 AC012075.1-201ENST00000436549 580 ntBASIC5.77□□□□□ -1.49
CLDN6P56747 GAPDHP58-201ENST00000438477 1006 ntBASIC5.77□□□□□ -1.49
CLDN6P56747 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.77□□□□□ -1.49
CLDN6P56747 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN6P56747 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.77□□□□□ -1.49
CLDN6P56747 AC108043.1-201ENST00000512696 574 ntBASIC5.77□□□□□ -1.49
CLDN6P56747 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.77□□□□□ -1.49
CLDN6P56747 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN6P56747 AP005639.1-201ENST00000526939 192 ntBASIC5.77□□□□□ -1.49
CLDN6P56747 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.77□□□□□ -1.49
CLDN6P56747 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.77□□□□□ -1.49
CLDN6P56747 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.77□□□□□ -1.49
CLDN6P56747 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN6P56747 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN6P56747 AC141002.1-201ENST00000607025 279 ntBASIC5.77□□□□□ -1.49
CLDN6P56747 AC096861.1-201ENST00000616652 240 ntBASIC5.77□□□□□ -1.49
CLDN6P56747 AP001885.1-201ENST00000621658 558 ntBASIC5.77□□□□□ -1.49
CLDN6P56747 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.77□□□□□ -1.49
CLDN6P56747 AC027279.4-201ENST00000624371 2072 ntBASIC5.77□□□□□ -1.49
CLDN6P56747 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.77□□□□□ -1.49
CLDN6P56747 BIN2P1-201ENST00000504996 1530 ntBASIC5.77□□□□□ -1.49
CLDN6P56747 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.77□□□□□ -1.49
CLDN6P56747 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CLDN6P56747 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CLDN6P56747 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
CLDN6P56747 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.77□□□□□ -1.49
CLDN6P56747 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.77□□□□□ -1.49
CLDN6P56747 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN6P56747 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN6P56747 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN6P56747 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN6P56747 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN6P56747 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN6P56747 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN6P56747 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CLDN6P56747 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN6P56747 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN6P56747 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.76□□□□□ -1.49
CLDN6P56747 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN6P56747 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN6P56747 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN6P56747 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN6P56747 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN6P56747 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.76□□□□□ -1.49
CLDN6P56747 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN6P56747 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.76□□□□□ -1.49
CLDN6P56747 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
CLDN6P56747 RN7SKP128-201ENST00000364270 303 ntBASIC5.76□□□□□ -1.49
CLDN6P56747 MIR433-201ENST00000384837 93 ntBASIC5.76□□□□□ -1.49
CLDN6P56747 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN6P56747 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CLDN6P56747 OR6E1P-201ENST00000414424 923 ntBASIC5.76□□□□□ -1.49
CLDN6P56747 UBE2V1P14-201ENST00000415815 558 ntBASIC5.76□□□□□ -1.49
CLDN6P56747 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.76□□□□□ -1.49
CLDN6P56747 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.76□□□□□ -1.49
CLDN6P56747 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.76□□□□□ -1.49
CLDN6P56747 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.76□□□□□ -1.49
CLDN6P56747 RN7SL72P-201ENST00000460697 269 ntBASIC5.76□□□□□ -1.49
CLDN6P56747 RN7SL826P-201ENST00000479724 288 ntBASIC5.76□□□□□ -1.49
CLDN6P56747 RPL17P2-201ENST00000491913 451 ntBASIC5.76□□□□□ -1.49
CLDN6P56747 AC108693.1-201ENST00000496068 432 ntBASIC5.76□□□□□ -1.49
CLDN6P56747 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.76□□□□□ -1.49
CLDN6P56747 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.76□□□□□ -1.49
CLDN6P56747 RNA5SP92-201ENST00000516437 110 ntBASIC5.76□□□□□ -1.49
CLDN6P56747 SNORA43.3-201ENST00000517240 103 ntBASIC5.76□□□□□ -1.49
CLDN6P56747 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.76□□□□□ -1.49
CLDN6P56747 AC084337.1-201ENST00000524809 686 ntBASIC5.76□□□□□ -1.49
CLDN6P56747 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.76□□□□□ -1.49
CLDN6P56747 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN6P56747 AL136131.3-201ENST00000607600 188 ntBASIC5.76□□□□□ -1.49
CLDN6P56747 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN6P56747 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN6P56747 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN6P56747 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN6P56747 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CLDN6P56747 RPS2P45-201ENST00000469997 2057 ntBASIC5.76□□□□□ -1.49
CLDN6P56747 OR52B5P-204ENST00000641744 3467 ntBASIC5.76□□□□□ -1.49
CLDN6P56747 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.76□□□□□ -1.49
CLDN6P56747 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CLDN6P56747 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.76□□□□□ -1.49
CLDN6P56747 MAPK10-270ENST00000641102 3538 ntBASIC5.75□□□□□ -1.49
CLDN6P56747 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.75□□□□□ -1.49
CLDN6P56747 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms