Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AL034549.2-201ENST00000618285 3373 ntBASIC8.15□□□□□ -1.1
CLTCL1P53675 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CLTCL1P53675 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CLTCL1P53675 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC8.15□□□□□ -1.1
CLTCL1P53675 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC8.15□□□□□ -1.1
CLTCL1P53675 RNU1-19P-201ENST00000363306 165 ntBASIC8.15□□□□□ -1.1
CLTCL1P53675 SNORA74A-201ENST00000364089 198 ntBASIC8.15□□□□□ -1.1
CLTCL1P53675 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CLTCL1P53675 AL360271.1-201ENST00000395679 510 ntBASIC8.15□□□□□ -1.1
CLTCL1P53675 AP000534.2-201ENST00000412729 568 ntBASIC8.15□□□□□ -1.1
CLTCL1P53675 AC108075.1-201ENST00000424692 529 ntBASIC8.15□□□□□ -1.1
CLTCL1P53675 AC073410.1-201ENST00000435125 589 ntBASIC8.15□□□□□ -1.1
CLTCL1P53675 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
CLTCL1P53675 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC8.15□□□□□ -1.1
CLTCL1P53675 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CLTCL1P53675 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC8.15□□□□□ -1.1
CLTCL1P53675 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC8.15□□□□□ -1.1
CLTCL1P53675 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC8.15□□□□□ -1.1
CLTCL1P53675 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC8.15□□□□□ -1.1
CLTCL1P53675 AC106730.2-201ENST00000566641 540 ntBASIC8.15□□□□□ -1.1
CLTCL1P53675 MIR6798-201ENST00000612887 67 ntBASIC8.15□□□□□ -1.1
CLTCL1P53675 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC8.15□□□□□ -1.1
CLTCL1P53675 MIR6730-201ENST00000622213 67 ntBASIC8.15□□□□□ -1.1
CLTCL1P53675 SAMMSON-227ENST00000642114 1199 ntBASIC8.15□□□□□ -1.1
CLTCL1P53675 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CLTCL1P53675 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CLTCL1P53675 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
CLTCL1P53675 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC8.15□□□□□ -1.1
CLTCL1P53675 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CLTCL1P53675 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
CLTCL1P53675 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CLTCL1P53675 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
CLTCL1P53675 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
CLTCL1P53675 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC8.15□□□□□ -1.11
CLTCL1P53675 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC8.15□□□□□ -1.11
CLTCL1P53675 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
CLTCL1P53675 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CLTCL1P53675 AP002991.2-201ENST00000623807 2801 ntBASIC8.14□□□□□ -1.11
CLTCL1P53675 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC8.14□□□□□ -1.11
CLTCL1P53675 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC8.14□□□□□ -1.11
CLTCL1P53675 SNORA70-201ENST00000384436 135 ntBASIC8.14□□□□□ -1.11
CLTCL1P53675 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC8.14□□□□□ -1.11
CLTCL1P53675 LDHAP2-201ENST00000437325 985 ntBASIC8.14□□□□□ -1.11
CLTCL1P53675 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC8.14□□□□□ -1.11
CLTCL1P53675 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC8.14□□□□□ -1.11
CLTCL1P53675 AC090638.1-201ENST00000498296 909 ntBASIC8.14□□□□□ -1.11
CLTCL1P53675 TOMM22P4-201ENST00000511318 336 ntBASIC8.14□□□□□ -1.11
CLTCL1P53675 OR8G3P-201ENST00000533406 921 ntBASIC8.14□□□□□ -1.11
CLTCL1P53675 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC8.14□□□□□ -1.11
CLTCL1P53675 AF117829.2-201ENST00000619538 361 ntBASIC8.14□□□□□ -1.11
CLTCL1P53675 AC132068.1-201ENST00000623805 459 ntBASIC8.14□□□□□ -1.11
CLTCL1P53675 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CLTCL1P53675 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
CLTCL1P53675 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CLTCL1P53675 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CLTCL1P53675 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CLTCL1P53675 AL662795.2-201ENST00000624252 3706 ntBASIC8.14□□□□□ -1.11
CLTCL1P53675 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC8.14□□□□□ -1.11
CLTCL1P53675 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CLTCL1P53675 AC007342.5-201ENST00000571340 2142 ntBASIC8.14□□□□□ -1.11
CLTCL1P53675 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
CLTCL1P53675 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CLTCL1P53675 SNORA16A-201ENST00000384342 137 ntBASIC8.14□□□□□ -1.11
CLTCL1P53675 RNU1-106P-201ENST00000384382 164 ntBASIC8.14□□□□□ -1.11
CLTCL1P53675 RNA5SP91-201ENST00000390902 119 ntBASIC8.14□□□□□ -1.11
CLTCL1P53675 AL390774.1-201ENST00000411924 246 ntBASIC8.14□□□□□ -1.11
CLTCL1P53675 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CLTCL1P53675 RNU1-88P-201ENST00000459274 128 ntBASIC8.14□□□□□ -1.11
CLTCL1P53675 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC8.14□□□□□ -1.11
CLTCL1P53675 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC8.14□□□□□ -1.11
CLTCL1P53675 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
CLTCL1P53675 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CLTCL1P53675 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC8.13□□□□□ -1.11
CLTCL1P53675 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC8.13□□□□□ -1.11
CLTCL1P53675 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
CLTCL1P53675 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CLTCL1P53675 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC8.13□□□□□ -1.11
CLTCL1P53675 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CLTCL1P53675 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
CLTCL1P53675 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
CLTCL1P53675 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC8.13□□□□□ -1.11
CLTCL1P53675 SPATA31C1-201ENST00000420021 3895 ntBASIC8.13□□□□□ -1.11
CLTCL1P53675 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC8.13□□□□□ -1.11
CLTCL1P53675 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
CLTCL1P53675 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CLTCL1P53675 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
CLTCL1P53675 U8.4-201ENST00000363626 134 ntBASIC8.13□□□□□ -1.11
CLTCL1P53675 OR10G5P-201ENST00000532733 358 ntBASIC8.13□□□□□ -1.11
CLTCL1P53675 AL121594.2-201ENST00000541658 472 ntBASIC8.13□□□□□ -1.11
CLTCL1P53675 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CLTCL1P53675 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC8.13□□□□□ -1.11
CLTCL1P53675 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CLTCL1P53675 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CLTCL1P53675 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CLTCL1P53675 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CLTCL1P53675 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CLTCL1P53675 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CLTCL1P53675 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CLTCL1P53675 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC8.12□□□□□ -1.11
CLTCL1P53675 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms