Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AL355834.1-201ENST00000556602 3965 ntBASIC6.59□□□□□ -1.36
COPB1P53618 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
COPB1P53618 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COPB1P53618 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COPB1P53618 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.58□□□□□ -1.36
COPB1P53618 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
COPB1P53618 OR7E25P-201ENST00000344844 931 ntBASIC6.58□□□□□ -1.36
COPB1P53618 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COPB1P53618 RN7SKP128-201ENST00000364270 303 ntBASIC6.58□□□□□ -1.36
COPB1P53618 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.58□□□□□ -1.36
COPB1P53618 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.58□□□□□ -1.36
COPB1P53618 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.58□□□□□ -1.36
COPB1P53618 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.58□□□□□ -1.36
COPB1P53618 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.58□□□□□ -1.36
COPB1P53618 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
COPB1P53618 CAB39P1-201ENST00000502277 460 ntBASIC6.58□□□□□ -1.36
COPB1P53618 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.58□□□□□ -1.36
COPB1P53618 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
COPB1P53618 OR51A1P-201ENST00000511110 946 ntBASIC6.58□□□□□ -1.36
COPB1P53618 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.58□□□□□ -1.36
COPB1P53618 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
COPB1P53618 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.58□□□□□ -1.36
COPB1P53618 AC005632.2-201ENST00000564271 828 ntBASIC6.58□□□□□ -1.36
COPB1P53618 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC6.58□□□□□ -1.36
COPB1P53618 MIR4271-201ENST00000582451 67 ntBASIC6.58□□□□□ -1.36
COPB1P53618 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.58□□□□□ -1.36
COPB1P53618 AC015802.5-201ENST00000607478 399 ntBASIC6.58□□□□□ -1.36
COPB1P53618 AL355816.2-201ENST00000610049 647 ntBASIC6.58□□□□□ -1.36
COPB1P53618 AL359742.1-201ENST00000622497 540 ntBASIC6.58□□□□□ -1.36
COPB1P53618 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.58□□□□□ -1.36
COPB1P53618 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.58□□□□□ -1.36
COPB1P53618 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COPB1P53618 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
COPB1P53618 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COPB1P53618 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COPB1P53618 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COPB1P53618 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COPB1P53618 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COPB1P53618 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
COPB1P53618 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.58□□□□□ -1.36
COPB1P53618 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
COPB1P53618 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
COPB1P53618 AC138907.8-201ENST00000623981 2256 ntBASIC6.57□□□□□ -1.36
COPB1P53618 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.57□□□□□ -1.36
COPB1P53618 AC015799.1-201ENST00000622996 3122 ntBASIC6.57□□□□□ -1.36
COPB1P53618 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
COPB1P53618 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COPB1P53618 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
COPB1P53618 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
COPB1P53618 AC090181.3-201ENST00000624777 1514 ntBASIC6.57□□□□□ -1.36
COPB1P53618 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.57□□□□□ -1.36
COPB1P53618 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COPB1P53618 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COPB1P53618 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COPB1P53618 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COPB1P53618 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COPB1P53618 RN7SKP250-201ENST00000363924 321 ntBASIC6.57□□□□□ -1.36
COPB1P53618 U3.10-201ENST00000364459 214 ntBASIC6.57□□□□□ -1.36
COPB1P53618 SNORA64.3-201ENST00000365647 134 ntBASIC6.57□□□□□ -1.36
COPB1P53618 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
COPB1P53618 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
COPB1P53618 PRELID1P1-201ENST00000403549 660 ntBASIC6.57□□□□□ -1.36
COPB1P53618 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
COPB1P53618 RNA5SP156-201ENST00000410250 110 ntBASIC6.57□□□□□ -1.36
COPB1P53618 RN7SKP17-201ENST00000411242 351 ntBASIC6.57□□□□□ -1.36
COPB1P53618 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.57□□□□□ -1.36
COPB1P53618 AL645936.1-201ENST00000441979 518 ntBASIC6.57□□□□□ -1.36
COPB1P53618 AC245291.3-201ENST00000443400 292 ntBASIC6.57□□□□□ -1.36
COPB1P53618 AL590004.3-202ENST00000445883 451 ntBASIC6.57□□□□□ -1.36
COPB1P53618 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.57□□□□□ -1.36
COPB1P53618 RPL29P23-201ENST00000486188 442 ntBASIC6.57□□□□□ -1.36
COPB1P53618 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COPB1P53618 SNORA26.10-201ENST00000516427 141 ntBASIC6.57□□□□□ -1.36
COPB1P53618 SNORA81.2-201ENST00000516868 170 ntBASIC6.57□□□□□ -1.36
COPB1P53618 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.57□□□□□ -1.36
COPB1P53618 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC6.57□□□□□ -1.36
COPB1P53618 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.57□□□□□ -1.36
COPB1P53618 AC036111.2-201ENST00000533247 901 ntBASIC6.57□□□□□ -1.36
COPB1P53618 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.57□□□□□ -1.36
COPB1P53618 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC6.57□□□□□ -1.36
COPB1P53618 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.57□□□□□ -1.36
COPB1P53618 AC023310.2-201ENST00000553844 547 ntBASIC6.57□□□□□ -1.36
COPB1P53618 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
COPB1P53618 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.57□□□□□ -1.36
COPB1P53618 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.57□□□□□ -1.36
COPB1P53618 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC6.57□□□□□ -1.36
COPB1P53618 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.57□□□□□ -1.36
COPB1P53618 RPSAP75-201ENST00000605848 301 ntBASIC6.57□□□□□ -1.36
COPB1P53618 AL359091.2-201ENST00000609303 556 ntBASIC6.57□□□□□ -1.36
COPB1P53618 AL352984.2-201ENST00000611153 546 ntBASIC6.57□□□□□ -1.36
COPB1P53618 AC096861.1-201ENST00000616652 240 ntBASIC6.57□□□□□ -1.36
COPB1P53618 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
COPB1P53618 AC021766.1-201ENST00000624404 741 ntBASIC6.57□□□□□ -1.36
COPB1P53618 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.57□□□□□ -1.36
COPB1P53618 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
COPB1P53618 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
COPB1P53618 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COPB1P53618 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COPB1P53618 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COPB1P53618 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms