Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXD12P35452 AP002884.5-201ENST00000595053 1132 ntBASIC6.4□□□□□ -1.38
HOXD12P35452 MIR6768-201ENST00000610734 72 ntBASIC6.4□□□□□ -1.38
HOXD12P35452 AC109309.2-201ENST00000612597 332 ntBASIC6.4□□□□□ -1.38
HOXD12P35452 AL158062.1-201ENST00000619632 745 ntBASIC6.4□□□□□ -1.38
HOXD12P35452 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXD12P35452 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXD12P35452 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXD12P35452 FO681491.1-202ENST00000623392 737 ntBASIC6.4□□□□□ -1.38
HOXD12P35452 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
HOXD12P35452 AL590396.2-201ENST00000636511 1041 ntBASIC6.4□□□□□ -1.38
HOXD12P35452 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXD12P35452 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HOXD12P35452 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.4□□□□□ -1.39
HOXD12P35452 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HOXD12P35452 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HOXD12P35452 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HOXD12P35452 FO082842.1-201ENST00000423552 1370 ntBASIC6.4□□□□□ -1.39
HOXD12P35452 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
HOXD12P35452 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HOXD12P35452 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
HOXD12P35452 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HOXD12P35452 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HOXD12P35452 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.4□□□□□ -1.39
HOXD12P35452 AP001284.1-201ENST00000528393 2118 ntBASIC6.4□□□□□ -1.39
HOXD12P35452 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HOXD12P35452 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXD12P35452 PARP4P1-201ENST00000435945 2337 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXD12P35452 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
HOXD12P35452 RPL12P13-201ENST00000310055 497 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXD12P35452 RNU6-386P-201ENST00000362650 107 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 SNORA51.1-201ENST00000363243 140 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 AL672167.2-201ENST00000377164 879 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 RNU6-883P-201ENST00000384597 107 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 U3.23-201ENST00000391132 200 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 OR1F12-201ENST00000402365 945 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXD12P35452 AL445213.1-201ENST00000412589 747 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXD12P35452 RPL23AP85-201ENST00000421838 433 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 CHEK2P5-201ENST00000423877 246 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.39□□□□□ -1.39
HOXD12P35452 CR848007.2-201ENST00000424918 787 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.39□□□□□ -1.39
HOXD12P35452 MTCO1P51-201ENST00000427672 1060 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 RPL17P35-201ENST00000432217 549 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 MED28P4-201ENST00000433137 572 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 AC003989.1-201ENST00000434569 565 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 RPL23AP19-201ENST00000436229 369 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 AL590762.3-201ENST00000436372 640 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXD12P35452 C1DP3-201ENST00000455013 423 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.39□□□□□ -1.39
HOXD12P35452 AC023194.2-201ENST00000465398 406 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXD12P35452 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.39□□□□□ -1.39
HOXD12P35452 RPL12P31-201ENST00000478433 450 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 AC093827.1-201ENST00000480094 861 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 AC117395.1-201ENST00000487390 403 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXD12P35452 OR7E99P-201ENST00000505750 922 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 AC095052.1-201ENST00000509955 863 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 RN7SKP35-201ENST00000517210 151 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXD12P35452 IGHV4-55-201ENST00000520889 368 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXD12P35452 FXNP1-201ENST00000555153 337 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXD12P35452 AC016839.1-201ENST00000578162 867 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXD12P35452 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXD12P35452 AC021766.1-201ENST00000624404 741 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
HOXD12P35452 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXD12P35452 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXD12P35452 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXD12P35452 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXD12P35452 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXD12P35452 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
HOXD12P35452 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.39□□□□□ -1.39
HOXD12P35452 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXD12P35452 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
HOXD12P35452 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXD12P35452 AL355834.1-201ENST00000556602 3965 ntBASIC6.39□□□□□ -1.39
HOXD12P35452 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXD12P35452 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXD12P35452 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXD12P35452 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXD12P35452 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXD12P35452 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXD12P35452 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXD12P35452 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXD12P35452 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
HOXD12P35452 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXD12P35452 MIR365B-201ENST00000362317 111 ntBASIC6.38□□□□□ -1.39
HOXD12P35452 RNA5SP333-201ENST00000363466 118 ntBASIC6.38□□□□□ -1.39
HOXD12P35452 RNA5SP510-201ENST00000364697 99 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms