Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.83□□□□□ -1.48
ABCD3P28288 SOCS5P1-201ENST00000440415 949 ntBASIC5.83□□□□□ -1.48
ABCD3P28288 AC069277.2-201ENST00000454211 432 ntBASIC5.83□□□□□ -1.48
ABCD3P28288 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.83□□□□□ -1.48
ABCD3P28288 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.83□□□□□ -1.48
ABCD3P28288 PPP1R11P1-201ENST00000486095 376 ntBASIC5.83□□□□□ -1.48
ABCD3P28288 AL117692.1-201ENST00000494283 713 ntBASIC5.83□□□□□ -1.48
ABCD3P28288 OR4D12P-201ENST00000509361 911 ntBASIC5.83□□□□□ -1.48
ABCD3P28288 AC010343.2-201ENST00000510162 224 ntBASIC5.83□□□□□ -1.48
ABCD3P28288 KHDC1P1-201ENST00000511053 508 ntBASIC5.83□□□□□ -1.48
ABCD3P28288 RNA5SP206-201ENST00000516703 121 ntBASIC5.83□□□□□ -1.48
ABCD3P28288 AP003049.1-201ENST00000529418 457 ntBASIC5.83□□□□□ -1.48
ABCD3P28288 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.83□□□□□ -1.48
ABCD3P28288 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.83□□□□□ -1.48
ABCD3P28288 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.83□□□□□ -1.48
ABCD3P28288 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ABCD3P28288 AC091193.1-201ENST00000604640 448 ntBASIC5.83□□□□□ -1.48
ABCD3P28288 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.83□□□□□ -1.48
ABCD3P28288 AC092574.1-201ENST00000609771 420 ntBASIC5.83□□□□□ -1.48
ABCD3P28288 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.83□□□□□ -1.48
ABCD3P28288 AC004241.3-201ENST00000611728 517 ntBASIC5.83□□□□□ -1.48
ABCD3P28288 AL512506.1-201ENST00000613918 449 ntBASIC5.83□□□□□ -1.48
ABCD3P28288 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.83□□□□□ -1.48
ABCD3P28288 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.83□□□□□ -1.48
ABCD3P28288 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.83□□□□□ -1.48
ABCD3P28288 TCL6_3.1-201ENST00000619064 137 ntBASIC5.83□□□□□ -1.48
ABCD3P28288 AC009120.7-201ENST00000623452 780 ntBASIC5.83□□□□□ -1.48
ABCD3P28288 AC097372.4-201ENST00000625025 466 ntBASIC5.83□□□□□ -1.48
ABCD3P28288 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.83□□□□□ -1.48
ABCD3P28288 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.83□□□□□ -1.48
ABCD3P28288 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ABCD3P28288 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.83□□□□□ -1.48
ABCD3P28288 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ABCD3P28288 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ABCD3P28288 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
ABCD3P28288 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.83□□□□□ -1.48
ABCD3P28288 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ABCD3P28288 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ABCD3P28288 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ABCD3P28288 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.83□□□□□ -1.48
ABCD3P28288 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
ABCD3P28288 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.82□□□□□ -1.48
ABCD3P28288 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ABCD3P28288 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
ABCD3P28288 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.82□□□□□ -1.48
ABCD3P28288 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ABCD3P28288 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ABCD3P28288 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ABCD3P28288 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
ABCD3P28288 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.82□□□□□ -1.48
ABCD3P28288 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
ABCD3P28288 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.82□□□□□ -1.48
ABCD3P28288 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ABCD3P28288 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.82□□□□□ -1.48
ABCD3P28288 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.82□□□□□ -1.48
ABCD3P28288 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
ABCD3P28288 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.82□□□□□ -1.48
ABCD3P28288 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.82□□□□□ -1.48
ABCD3P28288 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ABCD3P28288 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ABCD3P28288 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ABCD3P28288 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ABCD3P28288 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
ABCD3P28288 GAPDHP15-201ENST00000398586 975 ntBASIC5.82□□□□□ -1.48
ABCD3P28288 UBE2V1P14-201ENST00000415815 558 ntBASIC5.82□□□□□ -1.48
ABCD3P28288 AC099782.1-201ENST00000425889 474 ntBASIC5.82□□□□□ -1.48
ABCD3P28288 EIF2S2P3-201ENST00000428356 999 ntBASIC5.82□□□□□ -1.48
ABCD3P28288 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ABCD3P28288 AC094019.1-201ENST00000434678 472 ntBASIC5.82□□□□□ -1.48
ABCD3P28288 AL513321.1-201ENST00000441175 761 ntBASIC5.82□□□□□ -1.48
ABCD3P28288 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.82□□□□□ -1.48
ABCD3P28288 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.82□□□□□ -1.48
ABCD3P28288 CYCSP53-201ENST00000455540 265 ntBASIC5.82□□□□□ -1.48
ABCD3P28288 VPS25P1-201ENST00000455691 508 ntBASIC5.82□□□□□ -1.48
ABCD3P28288 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.82□□□□□ -1.48
ABCD3P28288 RN7SL326P-201ENST00000477493 296 ntBASIC5.82□□□□□ -1.48
ABCD3P28288 MTCO1P31-201ENST00000506355 492 ntBASIC5.82□□□□□ -1.48
ABCD3P28288 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
ABCD3P28288 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.82□□□□□ -1.48
ABCD3P28288 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.82□□□□□ -1.48
ABCD3P28288 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
ABCD3P28288 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ABCD3P28288 AC087888.1-201ENST00000550884 1254 ntBASIC5.82□□□□□ -1.48
ABCD3P28288 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.82□□□□□ -1.48
ABCD3P28288 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.82□□□□□ -1.48
ABCD3P28288 AC020978.7-201ENST00000575953 1187 ntBASIC5.82□□□□□ -1.48
ABCD3P28288 AC005242.1-201ENST00000585658 438 ntBASIC5.82□□□□□ -1.48
ABCD3P28288 AC011497.2-201ENST00000600255 639 ntBASIC5.82□□□□□ -1.48
ABCD3P28288 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.82□□□□□ -1.48
ABCD3P28288 AL583832.1-201ENST00000603227 784 ntBASIC5.82□□□□□ -1.48
ABCD3P28288 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.82□□□□□ -1.48
ABCD3P28288 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
ABCD3P28288 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ABCD3P28288 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.82□□□□□ -1.48
ABCD3P28288 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ABCD3P28288 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
ABCD3P28288 GUCY1B2-204ENST00000531898 1979 ntBASIC5.82□□□□□ -1.48
ABCD3P28288 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
ABCD3P28288 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
ABCD3P28288 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms