Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.96□□□□□ -1.3
TOP1P11387 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.96□□□□□ -1.3
TOP1P11387 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.96□□□□□ -1.3
TOP1P11387 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.96□□□□□ -1.3
TOP1P11387 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.96□□□□□ -1.3
TOP1P11387 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.96□□□□□ -1.3
TOP1P11387 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
TOP1P11387 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.96□□□□□ -1.3
TOP1P11387 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.96□□□□□ -1.3
TOP1P11387 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.96□□□□□ -1.3
TOP1P11387 AC006530.1-201ENST00000555980 571 ntBASIC6.96□□□□□ -1.3
TOP1P11387 MIR132-201ENST00000591554 101 ntBASIC6.96□□□□□ -1.3
TOP1P11387 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.96□□□□□ -1.3
TOP1P11387 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.96□□□□□ -1.3
TOP1P11387 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.96□□□□□ -1.3
TOP1P11387 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.96□□□□□ -1.3
TOP1P11387 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.96□□□□□ -1.3
TOP1P11387 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.96□□□□□ -1.3
TOP1P11387 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.96□□□□□ -1.3
TOP1P11387 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
TOP1P11387 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
TOP1P11387 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.96□□□□□ -1.3
TOP1P11387 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
TOP1P11387 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.96□□□□□ -1.3
TOP1P11387 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TOP1P11387 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
TOP1P11387 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TOP1P11387 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
TOP1P11387 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
TOP1P11387 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TOP1P11387 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TOP1P11387 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TOP1P11387 AC091305.2-201ENST00000624049 1576 ntBASIC6.95□□□□□ -1.3
TOP1P11387 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
TOP1P11387 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
TOP1P11387 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
TOP1P11387 THAP12P9-201ENST00000503971 2360 ntBASIC6.95□□□□□ -1.3
TOP1P11387 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TOP1P11387 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
TOP1P11387 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TOP1P11387 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TOP1P11387 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TOP1P11387 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.95□□□□□ -1.3
TOP1P11387 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
TOP1P11387 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.95□□□□□ -1.3
TOP1P11387 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
TOP1P11387 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.95□□□□□ -1.3
TOP1P11387 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.95□□□□□ -1.3
TOP1P11387 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.95□□□□□ -1.3
TOP1P11387 AL390879.1-201ENST00000439143 386 ntBASIC6.95□□□□□ -1.3
TOP1P11387 AL162739.1-201ENST00000450606 307 ntBASIC6.95□□□□□ -1.3
TOP1P11387 ACA64.4-201ENST00000459070 127 ntBASIC6.95□□□□□ -1.3
TOP1P11387 AL035690.1-201ENST00000490892 383 ntBASIC6.95□□□□□ -1.3
TOP1P11387 RN7SL57P-201ENST00000493687 290 ntBASIC6.95□□□□□ -1.3
TOP1P11387 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.95□□□□□ -1.3
TOP1P11387 IGKV2-4-201ENST00000523070 340 ntBASIC6.95□□□□□ -1.3
TOP1P11387 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.95□□□□□ -1.3
TOP1P11387 OR7E158P-201ENST00000524483 910 ntBASIC6.95□□□□□ -1.3
TOP1P11387 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.95□□□□□ -1.3
TOP1P11387 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TOP1P11387 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TOP1P11387 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.95□□□□□ -1.3
TOP1P11387 COX6CP7-201ENST00000597056 208 ntBASIC6.95□□□□□ -1.3
TOP1P11387 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.95□□□□□ -1.3
TOP1P11387 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.95□□□□□ -1.3
TOP1P11387 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.95□□□□□ -1.3
TOP1P11387 AC022164.1-201ENST00000568767 2673 ntBASIC6.95□□□□□ -1.3
TOP1P11387 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
TOP1P11387 ZNF402P-201ENST00000404435 3100 ntBASIC6.95□□□□□ -1.3
TOP1P11387 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
TOP1P11387 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
TOP1P11387 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
TOP1P11387 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
TOP1P11387 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TOP1P11387 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TOP1P11387 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
TOP1P11387 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
TOP1P11387 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
TOP1P11387 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
TOP1P11387 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.94□□□□□ -1.3
TOP1P11387 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TOP1P11387 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
TOP1P11387 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TOP1P11387 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
TOP1P11387 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.94□□□□□ -1.3
TOP1P11387 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.94□□□□□ -1.3
TOP1P11387 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
TOP1P11387 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TOP1P11387 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
TOP1P11387 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TOP1P11387 OR52B3P-201ENST00000314715 928 ntBASIC6.94□□□□□ -1.3
TOP1P11387 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TOP1P11387 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
TOP1P11387 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
TOP1P11387 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
TOP1P11387 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.94□□□□□ -1.3
TOP1P11387 RPS4XP5-201ENST00000419038 768 ntBASIC6.94□□□□□ -1.3
TOP1P11387 AL512637.1-201ENST00000439523 1231 ntBASIC6.94□□□□□ -1.3
TOP1P11387 AC073109.1-201ENST00000445066 978 ntBASIC6.94□□□□□ -1.3
TOP1P11387 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms