Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC099782.1-201ENST00000425889 474 ntBASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 AC108479.1-201ENST00000431142 427 ntBASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 AC069154.1-201ENST00000432914 542 ntBASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 AC242426.1-201ENST00000435270 960 ntBASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 RPL31P3-201ENST00000458430 332 ntBASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 AC147055.3-201ENST00000510547 851 ntBASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 AP004609.2-201ENST00000532177 190 ntBASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 AC026956.1-201ENST00000558741 396 ntBASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 AL356801.1-201ENST00000559320 294 ntBASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 AL592494.3-201ENST00000609485 464 ntBASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 SFTPD-AS1-201ENST00000608229 5001 ntBASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 AC122713.2-201ENST00000624942 3335 ntBASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 MTND5P11-201ENST00000511037 1812 ntBASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 AC119674.1-202ENST00000641333 1860 ntBASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 AC053481.2-202ENST00000582394 1500 ntBASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC9□□□□□ -0.97
CSB-PGBD3P0DP91 CASC19-248ENST00000641674 1356 ntBASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 AC099786.3-201ENST00000565735 1410 ntBASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 RNU6-694P-201ENST00000364071 147 ntBASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 UBE2V1P10-201ENST00000414685 269 ntBASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 USP9YP26-201ENST00000421008 661 ntBASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 KRTAP3-4P-201ENST00000430780 280 ntBASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 AC110602.1-201ENST00000437414 318 ntBASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 NPM1P33-201ENST00000438918 872 ntBASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 AL353572.1-201ENST00000442490 417 ntBASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 EXTL2P1-201ENST00000446218 416 ntBASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 NDUFAF4P4-201ENST00000454883 502 ntBASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 Z83838.1-202ENST00000456225 839 ntBASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 RPS3AP22-201ENST00000488297 769 ntBASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 GAPDHP71-201ENST00000511530 1003 ntBASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 RFESD-208ENST00000513950 464 ntTSL 5 BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 AC109635.3-201ENST00000529536 185 ntBASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 AC068135.2-201ENST00000569293 1028 ntBASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 CTSLP2-201ENST00000580501 394 ntBASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 SYPL1P2-201ENST00000582878 727 ntBASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 PRELID3BP3-201ENST00000584963 545 ntBASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 AL365181.4-201ENST00000609800 547 ntBASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 AC026367.2-201ENST00000610630 553 ntBASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 AL158062.1-201ENST00000619632 745 ntBASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
CSB-PGBD3P0DP91 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 SMG1P5-202ENST00000529428 4219 ntBASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 SMG1P2-201ENST00000566127 4221 ntBASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 AC005832.2-201ENST00000538921 1430 ntBASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC8.98□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms