Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC8.41□□□□□ -1.06
HOXA2O43364 CLUHP10-201ENST00000631979 980 ntBASIC8.41□□□□□ -1.06
HOXA2O43364 TMEM106A-208ENST00000612339 3266 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
HOXA2O43364 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
HOXA2O43364 PLA2G4A-201ENST00000367466 2875 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
HOXA2O43364 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
HOXA2O43364 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
HOXA2O43364 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
HOXA2O43364 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
HOXA2O43364 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
HOXA2O43364 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
HOXA2O43364 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
HOXA2O43364 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
HOXA2O43364 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC8.4□□□□□ -1.06
HOXA2O43364 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
HOXA2O43364 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
HOXA2O43364 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC8.4□□□□□ -1.06
HOXA2O43364 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
HOXA2O43364 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC8.4□□□□□ -1.06
HOXA2O43364 NFRKB-202ENST00000524746 4114 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
HOXA2O43364 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
HOXA2O43364 AL034370.1-201ENST00000397254 1590 ntBASIC8.4□□□□□ -1.06
HOXA2O43364 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
HOXA2O43364 AMPH-202ENST00000356264 3418 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
HOXA2O43364 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
HOXA2O43364 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC8.4□□□□□ -1.06
HOXA2O43364 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC8.4□□□□□ -1.06
HOXA2O43364 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
HOXA2O43364 EEF1A1P12-201ENST00000443590 1346 ntBASIC8.4□□□□□ -1.06
HOXA2O43364 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
HOXA2O43364 SNORA10B-201ENST00000384458 133 ntBASIC8.4□□□□□ -1.06
HOXA2O43364 GSTA9P-201ENST00000406231 611 ntBASIC8.4□□□□□ -1.06
HOXA2O43364 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC8.4□□□□□ -1.06
HOXA2O43364 RN7SKP59-201ENST00000410520 314 ntBASIC8.4□□□□□ -1.06
HOXA2O43364 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC8.4□□□□□ -1.06
HOXA2O43364 USP9YP27-201ENST00000418455 438 ntBASIC8.4□□□□□ -1.06
HOXA2O43364 OR5P4P-201ENST00000424698 917 ntBASIC8.4□□□□□ -1.06
HOXA2O43364 AL138479.1-201ENST00000426913 484 ntBASIC8.4□□□□□ -1.06
HOXA2O43364 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC8.4□□□□□ -1.06
HOXA2O43364 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC8.4□□□□□ -1.06
HOXA2O43364 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
HOXA2O43364 AC099344.1-201ENST00000433548 492 ntBASIC8.4□□□□□ -1.06
HOXA2O43364 CLUHP1-201ENST00000435012 1190 ntBASIC8.4□□□□□ -1.06
HOXA2O43364 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC8.4□□□□□ -1.06
HOXA2O43364 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC8.4□□□□□ -1.06
HOXA2O43364 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC8.4□□□□□ -1.06
HOXA2O43364 AL157714.2-204ENST00000452283 973 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
HOXA2O43364 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC8.4□□□□□ -1.06
HOXA2O43364 CALM1P2-201ENST00000452941 448 ntBASIC8.4□□□□□ -1.06
HOXA2O43364 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC8.4□□□□□ -1.06
HOXA2O43364 TAAR3P-201ENST00000466706 1078 ntBASIC8.4□□□□□ -1.06
HOXA2O43364 TAAR3P-202ENST00000481759 1025 ntBASIC8.4□□□□□ -1.06
HOXA2O43364 AC106760.2-201ENST00000504159 619 ntBASIC8.4□□□□□ -1.06
HOXA2O43364 AC010409.2-201ENST00000505780 478 ntBASIC8.4□□□□□ -1.06
HOXA2O43364 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC8.4□□□□□ -1.06
HOXA2O43364 AC083923.1-201ENST00000523708 376 ntBASIC8.4□□□□□ -1.06
HOXA2O43364 AP002748.2-201ENST00000528671 348 ntBASIC8.4□□□□□ -1.06
HOXA2O43364 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC8.4□□□□□ -1.06
HOXA2O43364 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC8.4□□□□□ -1.06
HOXA2O43364 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
HOXA2O43364 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC8.4□□□□□ -1.06
HOXA2O43364 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC8.4□□□□□ -1.06
HOXA2O43364 RPL27-207ENST00000590864 569 ntTSL 2 BASIC8.4□□□□□ -1.06
HOXA2O43364 AC011453.2-201ENST00000603737 729 ntBASIC8.4□□□□□ -1.06
HOXA2O43364 NDUFB9P1-201ENST00000604683 510 ntBASIC8.4□□□□□ -1.06
HOXA2O43364 RN7SL715P-201ENST00000606972 286 ntBASIC8.4□□□□□ -1.06
HOXA2O43364 AC027807.2-201ENST00000616099 408 ntBASIC8.4□□□□□ -1.06
HOXA2O43364 HTR1DP1-201ENST00000616500 888 ntBASIC8.4□□□□□ -1.06
HOXA2O43364 AC136475.10-201ENST00000620253 385 ntBASIC8.4□□□□□ -1.06
HOXA2O43364 AC073348.1-201ENST00000623002 331 ntBASIC8.4□□□□□ -1.06
HOXA2O43364 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC8.4□□□□□ -1.06
HOXA2O43364 AC018692.2-201ENST00000624130 348 ntBASIC8.4□□□□□ -1.06
HOXA2O43364 MTND5P42-201ENST00000637720 498 ntBASIC8.4□□□□□ -1.06
HOXA2O43364 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC8.4□□□□□ -1.06
HOXA2O43364 NEDD4L-201ENST00000256830 2920 ntTSL 5 BASIC8.4□□□□□ -1.06
HOXA2O43364 OR51E1-202ENST00000530215 2942 ntBASIC8.4□□□□□ -1.06
HOXA2O43364 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
HOXA2O43364 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
HOXA2O43364 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC8.4□□□□□ -1.06
HOXA2O43364 GABRP-201ENST00000265294 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
HOXA2O43364 TTC21A-205ENST00000440121 3941 ntAPPRIS P3 TSL 2 BASIC8.4□□□□□ -1.07
HOXA2O43364 AC110716.2-201ENST00000563865 3945 ntBASIC8.4□□□□□ -1.07
HOXA2O43364 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.07
HOXA2O43364 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
HOXA2O43364 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
HOXA2O43364 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC8.4□□□□□ -1.07
HOXA2O43364 PSG3-204ENST00000595140 1724 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
HOXA2O43364 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
HOXA2O43364 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
HOXA2O43364 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
HOXA2O43364 AKAP4-202ENST00000376064 2864 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
HOXA2O43364 AC092279.2-201ENST00000623742 2189 ntBASIC8.39□□□□□ -1.07
HOXA2O43364 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HOXA2O43364 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HOXA2O43364 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC8.39□□□□□ -1.07
HOXA2O43364 TKTL2-201ENST00000280605 2654 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
HOXA2O43364 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
HOXA2O43364 HMGCLL1-201ENST00000274901 2475 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HOXA2O43364 FBXO38-203ENST00000394370 4132 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HOXA2O43364 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms