Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC010615.3-201ENST00000597319 394 ntBASIC5.71□□□□□ -1.5
SLC28A1O00337 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.71□□□□□ -1.5
SLC28A1O00337 AP005212.4-201ENST00000614206 710 ntBASIC5.71□□□□□ -1.5
SLC28A1O00337 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.71□□□□□ -1.5
SLC28A1O00337 AL157762.1-201ENST00000619612 415 ntBASIC5.71□□□□□ -1.5
SLC28A1O00337 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.71□□□□□ -1.5
SLC28A1O00337 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SLC28A1O00337 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.71□□□□□ -1.5
SLC28A1O00337 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
SLC28A1O00337 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SLC28A1O00337 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SLC28A1O00337 BCORP1-203ENST00000513194 5093 ntBASIC5.71□□□□□ -1.5
SLC28A1O00337 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
SLC28A1O00337 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
SLC28A1O00337 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.71□□□□□ -1.5
SLC28A1O00337 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
SLC28A1O00337 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SLC28A1O00337 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.71□□□□□ -1.5
SLC28A1O00337 AC025470.1-201ENST00000510053 2032 ntBASIC5.7□□□□□ -1.5
SLC28A1O00337 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC28A1O00337 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC28A1O00337 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC28A1O00337 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.7□□□□□ -1.5
SLC28A1O00337 AL355488.2-201ENST00000609909 2850 ntBASIC5.7□□□□□ -1.5
SLC28A1O00337 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC28A1O00337 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SLC28A1O00337 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SLC28A1O00337 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SLC28A1O00337 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC28A1O00337 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SLC28A1O00337 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
SLC28A1O00337 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC28A1O00337 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SLC28A1O00337 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.7□□□□□ -1.5
SLC28A1O00337 RN7SKP108-201ENST00000411367 328 ntBASIC5.7□□□□□ -1.5
SLC28A1O00337 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.7□□□□□ -1.5
SLC28A1O00337 MTND4LP21-201ENST00000415303 295 ntBASIC5.7□□□□□ -1.5
SLC28A1O00337 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.7□□□□□ -1.5
SLC28A1O00337 RPL7AP51-201ENST00000422016 760 ntBASIC5.7□□□□□ -1.5
SLC28A1O00337 UBE2V2P1-201ENST00000434717 398 ntBASIC5.7□□□□□ -1.5
SLC28A1O00337 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.7□□□□□ -1.5
SLC28A1O00337 AL356121.1-201ENST00000442911 156 ntBASIC5.7□□□□□ -1.5
SLC28A1O00337 RPS7P3-201ENST00000443360 580 ntBASIC5.7□□□□□ -1.5
SLC28A1O00337 AC010240.2-201ENST00000445363 1205 ntBASIC5.7□□□□□ -1.5
SLC28A1O00337 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.7□□□□□ -1.5
SLC28A1O00337 EIF4E2P2-201ENST00000492033 736 ntBASIC5.7□□□□□ -1.5
SLC28A1O00337 SNRPCP11-201ENST00000492453 205 ntBASIC5.7□□□□□ -1.5
SLC28A1O00337 AL133372.1-201ENST00000493565 745 ntBASIC5.7□□□□□ -1.5
SLC28A1O00337 GOLGA5P1-201ENST00000507317 980 ntBASIC5.7□□□□□ -1.5
SLC28A1O00337 NPM1P21-201ENST00000513394 762 ntBASIC5.7□□□□□ -1.5
SLC28A1O00337 AC136777.2-201ENST00000522979 358 ntBASIC5.7□□□□□ -1.5
SLC28A1O00337 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.7□□□□□ -1.5
SLC28A1O00337 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.7□□□□□ -1.5
SLC28A1O00337 MT1CP-201ENST00000567054 174 ntBASIC5.7□□□□□ -1.5
SLC28A1O00337 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.7□□□□□ -1.5
SLC28A1O00337 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC28A1O00337 AL513327.3-201ENST00000602618 469 ntBASIC5.7□□□□□ -1.5
SLC28A1O00337 AC025857.2-201ENST00000602711 238 ntBASIC5.7□□□□□ -1.5
SLC28A1O00337 SMIM12P1-201ENST00000603004 274 ntBASIC5.7□□□□□ -1.5
SLC28A1O00337 AC073389.3-201ENST00000609434 935 ntBASIC5.7□□□□□ -1.5
SLC28A1O00337 AC092681.3-201ENST00000609463 678 ntBASIC5.7□□□□□ -1.5
SLC28A1O00337 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC28A1O00337 AL512652.1-201ENST00000619006 500 ntBASIC5.7□□□□□ -1.5
SLC28A1O00337 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SLC28A1O00337 RNF19BPY-201ENST00000458209 1550 ntBASIC5.7□□□□□ -1.5
SLC28A1O00337 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.7□□□□□ -1.5
SLC28A1O00337 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
SLC28A1O00337 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC28A1O00337 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC28A1O00337 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SLC28A1O00337 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.69□□□□□ -1.5
SLC28A1O00337 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC28A1O00337 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC28A1O00337 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
SLC28A1O00337 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.69□□□□□ -1.5
SLC28A1O00337 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC28A1O00337 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.69□□□□□ -1.5
SLC28A1O00337 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.69□□□□□ -1.5
SLC28A1O00337 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC28A1O00337 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC28A1O00337 RBPJP7-201ENST00000442803 1447 ntBASIC5.69□□□□□ -1.5
SLC28A1O00337 RBPJP5-201ENST00000449433 1447 ntBASIC5.69□□□□□ -1.5
SLC28A1O00337 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SLC28A1O00337 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.69□□□□□ -1.5
SLC28A1O00337 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC28A1O00337 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
SLC28A1O00337 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC28A1O00337 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC28A1O00337 U3.10-201ENST00000364459 214 ntBASIC5.69□□□□□ -1.5
SLC28A1O00337 RN7SKP186-201ENST00000365371 303 ntBASIC5.69□□□□□ -1.5
SLC28A1O00337 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.69□□□□□ -1.5
SLC28A1O00337 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC28A1O00337 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
SLC28A1O00337 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC28A1O00337 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC28A1O00337 MRPS21P2-201ENST00000424704 264 ntBASIC5.69□□□□□ -1.5
SLC28A1O00337 AC092865.3-201ENST00000425390 1026 ntBASIC5.69□□□□□ -1.5
SLC28A1O00337 RPSAP65-201ENST00000429660 595 ntBASIC5.69□□□□□ -1.5
SLC28A1O00337 AL445928.1-201ENST00000435545 222 ntBASIC5.69□□□□□ -1.5
SLC28A1O00337 LINC00328-2P-201ENST00000436585 219 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms