Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AC092647.2-201ENST00000452998 253 ntBASIC2.3□□□□□ -2.04
MACF1Q9UPN3 TAAR4P-201ENST00000454843 1039 ntBASIC2.3□□□□□ -2.04
MACF1Q9UPN3 RN7SKP147-201ENST00000517154 244 ntBASIC2.3□□□□□ -2.04
MACF1Q9UPN3 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 CTDSPL2-201ENST00000260327 6828 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 AFF1-202ENST00000395146 9285 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 AC012313.8-201ENST00000595059 5402 ntBASIC2.3□□□□□ -2.04
MACF1Q9UPN3 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 FCRL5-201ENST00000361835 5390 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 AC110373.1-201ENST00000505994 3505 ntBASIC2.3□□□□□ -2.04
MACF1Q9UPN3 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 AL590762.1-201ENST00000391782 432 ntBASIC2.3□□□□□ -2.04
MACF1Q9UPN3 HIST1H3PS1-201ENST00000404612 417 ntBASIC2.3□□□□□ -2.04
MACF1Q9UPN3 AC124944.2-201ENST00000429866 1242 ntBASIC2.3□□□□□ -2.04
MACF1Q9UPN3 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 AC068831.4-201ENST00000556118 109 ntBASIC2.3□□□□□ -2.04
MACF1Q9UPN3 AL356752.1-201ENST00000615844 593 ntBASIC2.3□□□□□ -2.04
MACF1Q9UPN3 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 AC104837.1-201ENST00000444644 1587 ntBASIC2.3□□□□□ -2.04
MACF1Q9UPN3 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 BX284613.1-201ENST00000452221 1641 ntBASIC2.3□□□□□ -2.04
MACF1Q9UPN3 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 SNORA70F-201ENST00000384142 135 ntBASIC2.3□□□□□ -2.04
MACF1Q9UPN3 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 MAL2-207ENST00000522828 603 ntTSL 3 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 USP3-201ENST00000268049 5311 ntTSL 5 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 AL136981.1-203ENST00000451452 3844 ntBASIC2.3□□□□□ -2.04
MACF1Q9UPN3 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 KARSP3-201ENST00000571212 1504 ntBASIC2.3□□□□□ -2.04
MACF1Q9UPN3 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 GSTA6P-201ENST00000424144 582 ntBASIC2.3□□□□□ -2.04
MACF1Q9UPN3 CBX1P1-201ENST00000440184 427 ntBASIC2.3□□□□□ -2.04
MACF1Q9UPN3 FHP1-201ENST00000442741 703 ntBASIC2.3□□□□□ -2.04
MACF1Q9UPN3 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 AC140172.1-201ENST00000502928 141 ntBASIC2.3□□□□□ -2.04
MACF1Q9UPN3 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 DIP2C-201ENST00000280886 7888 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 IMMTP1-201ENST00000435590 2219 ntBASIC2.3□□□□□ -2.04
MACF1Q9UPN3 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 RIMKLBP2-201ENST00000424737 654 ntBASIC2.3□□□□□ -2.04
MACF1Q9UPN3 AC114755.4-201ENST00000439114 443 ntBASIC2.3□□□□□ -2.04
MACF1Q9UPN3 AL591363.1-201ENST00000450091 483 ntBASIC2.3□□□□□ -2.04
MACF1Q9UPN3 RN7SL814P-201ENST00000487715 300 ntBASIC2.3□□□□□ -2.04
MACF1Q9UPN3 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 AC211486.3-201ENST00000412694 621 ntBASIC2.3□□□□□ -2.04
MACF1Q9UPN3 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC2.3□□□□□ -2.04
MACF1Q9UPN3 AL627230.1-201ENST00000613077 211 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms