Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 OR7E161P-202ENST00000641994 1033 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 DCAF1-202ENST00000423656 5946 ntAPPRIS P4 TSL 5 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 AL662907.2-201ENST00000624339 3448 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 LINC01877-203ENST00000439734 2287 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 AC022182.3-201ENST00000529239 2167 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 SBF2-201ENST00000256190 7439 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 AC104806.2-201ENST00000502400 1991 ntTSL 2 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 CLCN3P1-202ENST00000609203 1944 ntTSL 2 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 SESTD1-203ENST00000428443 10615 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 IGSF22-205ENST00000513874 4284 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 MTF2-201ENST00000370298 4125 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 SF3B2-206ENST00000528302 3254 ntTSL 5 BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 GPN1-210ENST00000515877 1646 ntTSL 5 BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 USP32P1-201ENST00000341745 3233 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 GSTM4-203ENST00000369833 3990 ntTSL 5 BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 LINC01140-201ENST00000461990 3181 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 MTND4P1-201ENST00000457501 1466 ntBASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 WARS-204ENST00000392882 2938 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 AP000977.1-201ENST00000501964 2908 ntTSL 2 BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 NAALAD2-210ENST00000534061 3600 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 PHACTR2P1-201ENST00000605639 1414 ntBASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 ARHGAP42P2-201ENST00000416089 2140 ntBASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 ASAP1-IT2-201ENST00000626977 2031 ntBASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 OR2M1P-201ENST00000318104 951 ntBASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 RNU6-534P-201ENST00000364877 106 ntBASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 SSX6-201ENST00000376932 562 ntBASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 RNU1-11P-201ENST00000383975 164 ntBASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 SNORA70I-201ENST00000384544 135 ntBASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 Y_RNA.573-201ENST00000384763 105 ntBASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 SNORA75.4-201ENST00000391278 119 ntBASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 AC068533.2-201ENST00000411872 306 ntBASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 RPL26P29-201ENST00000415623 438 ntBASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 AL593856.1-201ENST00000419949 805 ntBASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 ARMC4P1-201ENST00000438905 707 ntBASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 EIF4A1P6-201ENST00000448133 1210 ntBASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 AL357127.1-201ENST00000451295 438 ntTSL 3 BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 AC104971.1-201ENST00000495117 578 ntBASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 AL049830.4-201ENST00000555149 351 ntBASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 NPM1P5-201ENST00000557228 838 ntBASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 MTCO3P22-201ENST00000603219 784 ntBASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 AP001521.2-201ENST00000608772 546 ntBASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 AL359535.1-201ENST00000612100 1087 ntBASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 AL592148.2-201ENST00000612210 372 ntBASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 AC073348.1-201ENST00000623002 331 ntBASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 ALDH1L2-201ENST00000258494 7547 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 ANKRD20A5P-201ENST00000431648 3556 ntBASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 CLUHP3-206ENST00000562354 4117 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 LINC02260-201ENST00000508484 2216 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 OR9I1-202ENST00000641439 3184 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 ZNF733P-202ENST00000444809 1573 ntBASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 FRG2B-202ENST00000443774 2094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
COL25A1Q9BXS0 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 SF3A3P1-201ENST00000446317 1477 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 MLANA-203ENST00000381477 2415 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AL022578.1-201ENST00000439330 1433 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 DDIAS-207ENST00000528759 3278 ntTSL 2 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 LINC00672-201ENST00000583195 3692 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 NFRKB-202ENST00000524746 4114 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 LINC02239-201ENST00000504339 2290 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 PRUNE1-203ENST00000368935 2238 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AC007126.1-201ENST00000508202 4781 ntBASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL25A1Q9BXS0 AF127936.2-201ENST00000455253 1724 ntTSL 5 BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms