Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.9□□□□□ -1.63
HDHD3Q9BSH5 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
HDHD3Q9BSH5 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC4.9□□□□□ -1.63
HDHD3Q9BSH5 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HDHD3Q9BSH5 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HDHD3Q9BSH5 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.9□□□□□ -1.63
HDHD3Q9BSH5 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 BCORP1-203ENST00000513194 5093 ntBASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 SELENOWP1-201ENST00000322792 252 ntBASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 RNA5SP198-201ENST00000410376 127 ntBASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 RN7SKP279-201ENST00000411383 298 ntBASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 RPL35AP3-201ENST00000414680 288 ntBASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 AC092865.3-201ENST00000425390 1026 ntBASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 FTO-202ENST00000431610 707 ntTSL 3 BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 MTND2P40-201ENST00000436718 841 ntBASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 AL353662.1-201ENST00000439099 327 ntBASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 RPL12P49-201ENST00000441100 121 ntBASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 AC015983.1-201ENST00000441577 373 ntBASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 AC023141.8-201ENST00000442554 208 ntBASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 AC010240.2-201ENST00000445363 1205 ntBASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 RNU1-88P-201ENST00000459274 128 ntBASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 PPP1R11P1-201ENST00000486095 376 ntBASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 OR7E99P-201ENST00000505750 922 ntBASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 RNA5SP441-201ENST00000516809 88 ntBASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 NPM1P5-201ENST00000557228 838 ntBASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 SETP3-201ENST00000581726 813 ntBASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 OR7A8P-201ENST00000595427 913 ntBASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 HIRAP1-201ENST00000605318 787 ntBASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 AC092681.3-201ENST00000609463 678 ntBASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 AC016252.1-201ENST00000609721 474 ntBASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 AC015712.7-201ENST00000615211 635 ntBASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 AC008627.1-201ENST00000517511 1704 ntBASIC4.89□□□□□ -1.63
HDHD3Q9BSH5 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 USP40-202ENST00000409945 1946 ntTSL 2 BASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 RN7SKP185-201ENST00000362813 326 ntBASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 RN7SKP38-201ENST00000410782 309 ntBASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 AK3P5-201ENST00000432033 519 ntBASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 TRIM60P16-201ENST00000444048 694 ntBASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 AC023245.1-201ENST00000468501 517 ntBASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 AC005017.1-201ENST00000482002 490 ntBASIC4.88□□□□□ -1.63
HDHD3Q9BSH5 OR7E157P-201ENST00000494376 911 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms