Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 HNRNPCP1-201ENST00000556181 766 ntBASIC8.59□□□□□ -1.03
TRIM47Q96LD4 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 AC092354.1-201ENST00000606057 376 ntBASIC8.59□□□□□ -1.03
TRIM47Q96LD4 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 AC069499.2-201ENST00000610665 382 ntBASIC8.59□□□□□ -1.03
TRIM47Q96LD4 AC004223.4-201ENST00000612426 332 ntBASIC8.59□□□□□ -1.03
TRIM47Q96LD4 AL121583.1-201ENST00000612444 682 ntBASIC8.59□□□□□ -1.03
TRIM47Q96LD4 AC008121.3-201ENST00000618726 433 ntBASIC8.59□□□□□ -1.03
TRIM47Q96LD4 AC004836.1-201ENST00000623032 634 ntBASIC8.59□□□□□ -1.03
TRIM47Q96LD4 AC007603.3-201ENST00000636915 979 ntBASIC8.59□□□□□ -1.03
TRIM47Q96LD4 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 MAPK10-290ENST00000641237 2826 ntBASIC8.59□□□□□ -1.03
TRIM47Q96LD4 HSPD1P1-201ENST00000503199 1726 ntBASIC8.59□□□□□ -1.03
TRIM47Q96LD4 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
TRIM47Q96LD4 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC8.59□□□□□ -1.04
TRIM47Q96LD4 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
TRIM47Q96LD4 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC8.59□□□□□ -1.04
TRIM47Q96LD4 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 CR383656.5-201ENST00000547616 1340 ntBASIC8.58□□□□□ -1.04
TRIM47Q96LD4 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 AL390195.2-201ENST00000564771 2023 ntBASIC8.58□□□□□ -1.04
TRIM47Q96LD4 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 MIR555-201ENST00000384987 96 ntBASIC8.58□□□□□ -1.04
TRIM47Q96LD4 RNU1-56P-201ENST00000391303 164 ntBASIC8.58□□□□□ -1.04
TRIM47Q96LD4 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 PRELID1P2-201ENST00000407805 396 ntBASIC8.58□□□□□ -1.04
TRIM47Q96LD4 GSTA10P-201ENST00000412182 576 ntBASIC8.58□□□□□ -1.04
TRIM47Q96LD4 AL157698.1-201ENST00000415190 1011 ntBASIC8.58□□□□□ -1.04
TRIM47Q96LD4 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 USP9YP15-201ENST00000442391 422 ntBASIC8.58□□□□□ -1.04
TRIM47Q96LD4 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 RN7SL518P-201ENST00000491887 280 ntBASIC8.58□□□□□ -1.04
TRIM47Q96LD4 TECRP2-201ENST00000503270 928 ntBASIC8.58□□□□□ -1.04
TRIM47Q96LD4 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 RNU6-506P-201ENST00000516553 94 ntBASIC8.58□□□□□ -1.04
TRIM47Q96LD4 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 AC107958.1-201ENST00000556576 290 ntBASIC8.58□□□□□ -1.04
TRIM47Q96LD4 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 AL161729.3-201ENST00000603533 673 ntBASIC8.58□□□□□ -1.04
TRIM47Q96LD4 AC006270.3-201ENST00000605967 1036 ntBASIC8.58□□□□□ -1.04
TRIM47Q96LD4 U47924.1-201ENST00000606539 434 ntBASIC8.58□□□□□ -1.04
TRIM47Q96LD4 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC8.58□□□□□ -1.04
TRIM47Q96LD4 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 AC073869.7-201ENST00000640874 297 ntBASIC8.58□□□□□ -1.04
TRIM47Q96LD4 OR13D1-202ENST00000641530 945 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 RPL12P38-202ENST00000588627 2319 ntBASIC8.58□□□□□ -1.04
TRIM47Q96LD4 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
TRIM47Q96LD4 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 DDX10P2-201ENST00000417796 2614 ntBASIC8.57□□□□□ -1.04
TRIM47Q96LD4 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 FTO-222ENST00000637969 2889 ntTSL 5 BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
TRIM47Q96LD4 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms