Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.2□□□□□ -1.42
LIMK1P53667 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.2□□□□□ -1.42
LIMK1P53667 AL390726.5-202ENST00000564800 256 ntBASIC6.2□□□□□ -1.42
LIMK1P53667 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.2□□□□□ -1.42
LIMK1P53667 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.2□□□□□ -1.42
LIMK1P53667 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.2□□□□□ -1.42
LIMK1P53667 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.2□□□□□ -1.42
LIMK1P53667 AL589674.2-201ENST00000604304 337 ntBASIC6.2□□□□□ -1.42
LIMK1P53667 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6.2□□□□□ -1.42
LIMK1P53667 AC118658.2-201ENST00000618697 459 ntBASIC6.2□□□□□ -1.42
LIMK1P53667 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.2□□□□□ -1.42
LIMK1P53667 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.2□□□□□ -1.42
LIMK1P53667 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK1P53667 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK1P53667 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK1P53667 AP002370.1-201ENST00000528055 1602 ntBASIC6.2□□□□□ -1.42
LIMK1P53667 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.2□□□□□ -1.42
LIMK1P53667 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK1P53667 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK1P53667 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.2□□□□□ -1.42
LIMK1P53667 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK1P53667 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK1P53667 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK1P53667 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK1P53667 AC093278.2-201ENST00000564956 2485 ntBASIC6.2□□□□□ -1.42
LIMK1P53667 AL136531.3-201ENST00000624378 3658 ntBASIC6.2□□□□□ -1.42
LIMK1P53667 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK1P53667 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
LIMK1P53667 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LIMK1P53667 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.2□□□□□ -1.42
LIMK1P53667 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
LIMK1P53667 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
LIMK1P53667 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LIMK1P53667 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
LIMK1P53667 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LIMK1P53667 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LIMK1P53667 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LIMK1P53667 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
LIMK1P53667 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
LIMK1P53667 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LIMK1P53667 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
LIMK1P53667 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LIMK1P53667 RNA5SP132-201ENST00000364725 118 ntBASIC6.19□□□□□ -1.42
LIMK1P53667 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.19□□□□□ -1.42
LIMK1P53667 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.19□□□□□ -1.42
LIMK1P53667 TPTE2P1-204ENST00000435256 593 ntBASIC6.19□□□□□ -1.42
LIMK1P53667 GAPDHP58-201ENST00000438477 1006 ntBASIC6.19□□□□□ -1.42
LIMK1P53667 VN1R110P-201ENST00000438988 971 ntBASIC6.19□□□□□ -1.42
LIMK1P53667 HIGD1AP16-201ENST00000450986 258 ntBASIC6.19□□□□□ -1.42
LIMK1P53667 SEPT7P3-201ENST00000455017 621 ntBASIC6.19□□□□□ -1.42
LIMK1P53667 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.19□□□□□ -1.42
LIMK1P53667 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.19□□□□□ -1.42
LIMK1P53667 RN7SL193P-201ENST00000491708 276 ntBASIC6.19□□□□□ -1.42
LIMK1P53667 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.19□□□□□ -1.42
LIMK1P53667 AC027026.1-201ENST00000532323 742 ntBASIC6.19□□□□□ -1.42
LIMK1P53667 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LIMK1P53667 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.19□□□□□ -1.42
LIMK1P53667 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.19□□□□□ -1.42
LIMK1P53667 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.19□□□□□ -1.42
LIMK1P53667 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.19□□□□□ -1.42
LIMK1P53667 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.19□□□□□ -1.42
LIMK1P53667 COX6CP7-201ENST00000597056 208 ntBASIC6.19□□□□□ -1.42
LIMK1P53667 AL138960.1-201ENST00000613838 513 ntBASIC6.19□□□□□ -1.42
LIMK1P53667 AC015660.5-201ENST00000623238 564 ntBASIC6.19□□□□□ -1.42
LIMK1P53667 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
LIMK1P53667 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LIMK1P53667 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
LIMK1P53667 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.19□□□□□ -1.42
LIMK1P53667 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
LIMK1P53667 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LIMK1P53667 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LIMK1P53667 AL513548.1-201ENST00000562904 1724 ntBASIC6.19□□□□□ -1.42
LIMK1P53667 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.19□□□□□ -1.42
LIMK1P53667 AC068870.3-201ENST00000625077 2536 ntBASIC6.19□□□□□ -1.42
LIMK1P53667 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.19□□□□□ -1.42
LIMK1P53667 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.18□□□□□ -1.42
LIMK1P53667 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.18□□□□□ -1.42
LIMK1P53667 AC005261.6-201ENST00000623072 1387 ntBASIC6.18□□□□□ -1.42
LIMK1P53667 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
LIMK1P53667 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
LIMK1P53667 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LIMK1P53667 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
LIMK1P53667 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LIMK1P53667 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LIMK1P53667 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
LIMK1P53667 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.18□□□□□ -1.42
LIMK1P53667 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
LIMK1P53667 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.18□□□□□ -1.42
LIMK1P53667 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LIMK1P53667 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LIMK1P53667 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
LIMK1P53667 RNFT1P3-201ENST00000340898 1052 ntBASIC6.18□□□□□ -1.42
LIMK1P53667 RNU1-19P-201ENST00000363306 165 ntBASIC6.18□□□□□ -1.42
LIMK1P53667 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
LIMK1P53667 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
LIMK1P53667 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.18□□□□□ -1.42
LIMK1P53667 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
LIMK1P53667 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
LIMK1P53667 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.18□□□□□ -1.42
LIMK1P53667 AP003170.5-201ENST00000397185 335 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms