Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AL512605.1-202ENST00000441919 381 ntBASIC6.39□□□□□ -1.39
CASP4P49662 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.39□□□□□ -1.39
CASP4P49662 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.39□□□□□ -1.39
CASP4P49662 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.39□□□□□ -1.39
CASP4P49662 AL359955.2-201ENST00000445380 353 ntBASIC6.39□□□□□ -1.39
CASP4P49662 HLA-DPA3-207ENST00000454398 229 ntBASIC6.39□□□□□ -1.39
CASP4P49662 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CASP4P49662 AC006539.1-201ENST00000481419 501 ntBASIC6.39□□□□□ -1.39
CASP4P49662 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.39□□□□□ -1.39
CASP4P49662 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.39□□□□□ -1.39
CASP4P49662 TOMM20P1-201ENST00000534518 427 ntBASIC6.39□□□□□ -1.39
CASP4P49662 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.39□□□□□ -1.39
CASP4P49662 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.39□□□□□ -1.39
CASP4P49662 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.39□□□□□ -1.39
CASP4P49662 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
CASP4P49662 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.39□□□□□ -1.39
CASP4P49662 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.39□□□□□ -1.39
CASP4P49662 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.39□□□□□ -1.39
CASP4P49662 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CASP4P49662 FBXL21-201ENST00000297158 1305 ntBASIC6.39□□□□□ -1.39
CASP4P49662 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CASP4P49662 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.39□□□□□ -1.39
CASP4P49662 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CASP4P49662 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CASP4P49662 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.39□□□□□ -1.39
CASP4P49662 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CASP4P49662 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CASP4P49662 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.39□□□□□ -1.39
CASP4P49662 AC027088.4-201ENST00000611559 1947 ntBASIC6.38□□□□□ -1.39
CASP4P49662 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CASP4P49662 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.38□□□□□ -1.39
CASP4P49662 AP001157.1-201ENST00000550837 2339 ntBASIC6.38□□□□□ -1.39
CASP4P49662 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.38□□□□□ -1.39
CASP4P49662 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CASP4P49662 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CASP4P49662 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.38□□□□□ -1.39
CASP4P49662 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.38□□□□□ -1.39
CASP4P49662 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CASP4P49662 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CASP4P49662 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CASP4P49662 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.38□□□□□ -1.39
CASP4P49662 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.38□□□□□ -1.39
CASP4P49662 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.38□□□□□ -1.39
CASP4P49662 AC016739.1-201ENST00000405359 345 ntBASIC6.38□□□□□ -1.39
CASP4P49662 RN7SKP29-201ENST00000410957 272 ntBASIC6.38□□□□□ -1.39
CASP4P49662 TRGV5P-201ENST00000419915 354 ntBASIC6.38□□□□□ -1.39
CASP4P49662 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.38□□□□□ -1.39
CASP4P49662 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.38□□□□□ -1.39
CASP4P49662 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.38□□□□□ -1.39
CASP4P49662 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.38□□□□□ -1.39
CASP4P49662 PCBP2P1-201ENST00000437262 977 ntBASIC6.38□□□□□ -1.39
CASP4P49662 AC096775.1-201ENST00000437724 448 ntBASIC6.38□□□□□ -1.39
CASP4P49662 AC023141.8-201ENST00000442554 208 ntBASIC6.38□□□□□ -1.39
CASP4P49662 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.38□□□□□ -1.39
CASP4P49662 RSU1P1-201ENST00000453416 441 ntBASIC6.38□□□□□ -1.39
CASP4P49662 FRG2FP-204ENST00000453982 852 ntBASIC6.38□□□□□ -1.39
CASP4P49662 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.38□□□□□ -1.39
CASP4P49662 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.38□□□□□ -1.39
CASP4P49662 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.38□□□□□ -1.39
CASP4P49662 SCARNA18.1-201ENST00000516330 83 ntBASIC6.38□□□□□ -1.39
CASP4P49662 WBP1LP3-201ENST00000523033 208 ntBASIC6.38□□□□□ -1.39
CASP4P49662 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CASP4P49662 PCNAP4-201ENST00000532690 730 ntBASIC6.38□□□□□ -1.39
CASP4P49662 AC126615.2-201ENST00000553003 515 ntBASIC6.38□□□□□ -1.39
CASP4P49662 AL356801.1-201ENST00000559320 294 ntBASIC6.38□□□□□ -1.39
CASP4P49662 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CASP4P49662 AC006115.2-201ENST00000596823 202 ntBASIC6.38□□□□□ -1.39
CASP4P49662 AC005899.7-201ENST00000618199 588 ntBASIC6.38□□□□□ -1.39
CASP4P49662 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CASP4P49662 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.38□□□□□ -1.39
CASP4P49662 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CASP4P49662 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CASP4P49662 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CASP4P49662 AP004607.3-201ENST00000530354 3915 ntBASIC6.38□□□□□ -1.39
CASP4P49662 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.37□□□□□ -1.39
CASP4P49662 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CASP4P49662 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.37□□□□□ -1.39
CASP4P49662 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.37□□□□□ -1.39
CASP4P49662 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CASP4P49662 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
CASP4P49662 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.37□□□□□ -1.39
CASP4P49662 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CASP4P49662 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.37□□□□□ -1.39
CASP4P49662 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CASP4P49662 KYNUP3-201ENST00000574386 1341 ntBASIC6.37□□□□□ -1.39
CASP4P49662 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CASP4P49662 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CASP4P49662 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CASP4P49662 SEPT7P2-202ENST00000398921 823 ntBASIC6.37□□□□□ -1.39
CASP4P49662 LYPLA1P3-201ENST00000402650 695 ntBASIC6.37□□□□□ -1.39
CASP4P49662 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.37□□□□□ -1.39
CASP4P49662 AL590399.2-201ENST00000427536 309 ntBASIC6.37□□□□□ -1.39
CASP4P49662 HMGN1P2-201ENST00000445197 310 ntBASIC6.37□□□□□ -1.39
CASP4P49662 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.37□□□□□ -1.39
CASP4P49662 RPL12P39-201ENST00000455456 496 ntBASIC6.37□□□□□ -1.39
CASP4P49662 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.37□□□□□ -1.39
CASP4P49662 SETP21-201ENST00000514799 892 ntBASIC6.37□□□□□ -1.39
CASP4P49662 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CASP4P49662 TRIM77BP-201ENST00000524985 1119 ntBASIC6.37□□□□□ -1.39
CASP4P49662 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms